RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 FKBP10Q96AY3 582 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 LANCL2Q9NS86 450 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 SMOXQ9NWM0 555 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 KLHL9Q9P2J3 617 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 SLC5A10A0PJK1 596 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 CBX7O95931 251 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CCL4P13236 92 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 TECPR1Q7Z6L1 1165 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 ZMYND19Q96E35 227 aaPredicted RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 SYNPO2LQ9H987 977 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 ABCG2Q9UNQ0 655 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 A0A1W2PQ09 198 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 NME4O00746 187 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 GPR171O14626 319 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 EIF2S3P41091 472 aaKnown RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 TMPRSS3P57727 454 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 TCTN3Q6NUS6 607 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 PDLIM5Q96HC4 596 aaKnown RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 ZNF700Q9H0M5 742 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 PDFQ9HBH1 243 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 NPR2P20594 1047 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 IVDP26440 423 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CBLBQ13191 982 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 CFAP77Q6ZQR2 320 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 OR4D9Q8NGE8 314 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 C20orf27Q9GZN8 174 aa12.74□□□□□ -0.37
SIX4-201ENST00000216513 TP63Q9H3D4 680 aaPredicted RBP12.74□□□□□ -0.37
SIX4-201ENST00000216513 C12orf71A8MTZ7 269 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ZNF814B7Z6K7 855 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 D6RAR5 112 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 H0YIG0 161 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ABHD16AO95870 558 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 BMP5P22003 454 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 BIDP55957 195 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 IHHQ14623 411 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 CDK10Q15131 360 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 TBC1D28Q2M2D7 210 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ENTPD8Q5MY95 495 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 AWAT2Q6E213 333 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 TMPRSS12Q86WS5 348 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 RELL1Q8IUW5 271 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 OR5J2Q8NH18 312 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 TMEM174Q8WUU8 243 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 SH2B3Q9UQQ2 575 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 PHYHO14832 338 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ENTPD6O75354 484 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ACTC1P68032 377 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ACTA1P68133 377 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ZBED5Q49AG3 693 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 BORAQ6PGQ7 559 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ASCC1Q8N9N2 400 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 FEVQ99581 238 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 URM1Q9BTM9 101 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 PMS2P1A4D2B8 440 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 SRP14P37108 136 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 SGCZQ96LD1 299 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 LHPPQ9H008 270 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 TUBB1Q9H4B7 451 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ZNF355PQ9NSJ1 428 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 SLC22A31A6NKX4 558 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 NCR1O76036 304 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 SLC26A5P58743 744 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 SELPLGQ14242 412 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ZNF517Q6ZMY9 492 aaPredicted RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 BPIFA2Q96DR5 249 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 FKRPQ9H9S5 495 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 LRIT2A6NDA9 550 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 ZNF44P15621 663 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 CD40LGP29965 261 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 FRMPD2BQ6IN97 320 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 C7orf34Q96L11 122 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 OR10A4Q9H209 315 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 MED16Q9Y2X0 877 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 EXOSC1Q9Y3B2 195 aaKnown RBP12.73□□□□□ -0.37
SIX4-201ENST00000216513 F5P12259 2224 aa12.73□□□□□ -0.37
SIX4-201ENST00000216513 FAM183AA6NL82 134 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 ENSAO43768 121 aaKnown RBP12.72□□□□□ -0.37
SIX4-201ENST00000216513 POU4F2Q12837 409 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 TP53I3Q53FA7 332 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
SIX4-201ENST00000216513 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms