RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 DSCR9P59020 149 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 H3F3AP84243 136 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 VLDLRP98155 873 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 SLC25A3Q00325 362 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 LOXL1Q08397 574 aaPredicted RBP17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 AP1ARQ63HQ0 302 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 OR7E24Q6IFN5 339 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 CASP12Q6UXS9 341 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 ARFGAP2Q8N6H7 521 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 ZNF781Q8N8C0 355 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 WDR31Q8NA23 367 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 INPP5KQ9BT40 448 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 C1QTNF6Q9BXI9 259 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 DPY30Q9C005 99 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 MANSC1Q9H8J5 431 aa17.27■□□□□ 0.36
SYNGR1-201ENST00000216155 ANK2Q01484 3957 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 PRSS51A0A1B0GVH4 220 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 AP3D1O14617 1153 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 CPSF4O95639 269 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 CCNA2P20248 432 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 FKBP2P26885 142 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 MAGEA8P43361 318 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 IDH2P48735 452 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 CLK1P49759 484 aaKnown RBP17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 KCNJ10P78508 379 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 RAB35Q15286 201 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 C9orf135Q5VTT2 229 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 ZNF544Q6NX49 715 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 TESCQ96BS2 214 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 NEURL3Q96EH8 262 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 TMEM181Q9P2C4 612 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 CDC42EP3Q9UKI2 254 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 TRAPPC4Q9Y296 219 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 FLVCR1Q9Y5Y0 555 aa17.26■□□□□ 0.35
SYNGR1-201ENST00000216155 TMED7-TICAM2A0A0A6YYA0 188 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 TMEM72A0PK05 275 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 IMPDH2P12268 514 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC25A16P16260 332 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 HPCAP84074 193 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 IFFO1Q0D2I5 559 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 CASP8Q14790 479 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 GPAT3Q53EU6 434 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 SPANXN4Q5MJ08 99 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 ANXA8L1Q5VT79 327 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 NUDCD3Q8IVD9 361 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 DEPDC4Q8N2C3 294 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 C17orf78Q8N4C9 275 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 C1orf162Q8NEQ5 155 aaPredicted RBP17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 TMEM158Q8WZ71 300 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 FAM168AQ92567 244 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 CNOT9Q92600 299 aaKnown RBP17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC35A5Q9BS91 424 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC7A10Q9NS82 523 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 MARCOQ9UEW3 520 aaPredicted RBP17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 DCTN4Q9UJW0 460 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC9A8Q9Y2E8 581 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 TMED7Q9Y3B3 224 aa17.25■□□□□ 0.35
SYNGR1-201ENST00000216155 HMGN4O00479 90 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 PHF1O43189 567 aaPredicted RBP17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 CHI3L1P36222 383 aaPredicted RBP17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 HTR3AP46098 478 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 TSPO2Q5TGU0 170 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 C10orf105Q8TEF2 133 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 ROPN1BQ9BZX4 212 aaPredicted RBP17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 C20orf27Q9GZN8 174 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC38A1Q9H2H9 487 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 ROPN1Q9HAT0 212 aaPredicted RBP17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC17A5Q9NRA2 495 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 UPB1Q9UBR1 384 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 OSGIN1Q9UJX0 560 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 AMDHD2Q9Y303 409 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 ATP23Q9Y6H3 246 aa17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 HEATR1Q9H583 2144 aaKnown RBP17.24■□□□□ 0.35
SYNGR1-201ENST00000216155 ZC3H12DA2A288 527 aaKnown RBP17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 E9PBE3 544 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 ZNF208O43345 1280 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 LY6HO94772 140 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 SERPINE1P05121 402 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 CHRM4P08173 479 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 ZNF16P17020 682 aaPredicted RBP17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 POLR2HP52434 150 aaKnown RBP17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 VSNL1P62760 191 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC35A1P78382 337 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 SLC17A1Q14916 467 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 CHI3L2Q15782 390 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 ANKFN1Q8N957 763 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 VPS37AQ8NEZ2 397 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 NANOS1Q8WY41 292 aaKnown RBP17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 DDIT4LQ96D03 193 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 FKRPQ9H9S5 495 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 TMEM160Q9NX00 188 aa17.23■□□□□ 0.35
SYNGR1-201ENST00000216155 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 WDR91A4D1P6 747 aa17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 AGAP5A6NIR3 686 aa17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 ATP6V1G2-DDX39BF2Z307 99 aa17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 EIF1BO60739 113 aaKnown RBP17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 CSF3P09919 207 aa17.22■□□□□ 0.35
SYNGR1-201ENST00000216155 IGHV4-31P0DP07 118 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms