RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 LcorQ6ZPI3 433 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc43a2Q8CGA3 568 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Impa2Q91UZ5 290 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sapcd1Q9CY86 146 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Chp2Q9D869 196 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 HrgQ9ESB3 525 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nrip3Q9JJR9 240 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc30a7Q9JKN1 378 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cpne6Q9Z140 557 aa11.07□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Psme4Q5SSW2 1843 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vsig10l2A0A140LHF2 776 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 LckP06240 509 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 P06321 130 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 HckP08103 524 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rap1aP62835 184 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Opn5Q6VZZ7 377 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fads6Q80UG1 342 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Synpo2lQ8BWB1 975 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Arfrp1Q8BXL7 201 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ntmt1Q8R2U4 223 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mfsd6lQ8R3N2 586 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cbx7Q8VDS3 158 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1263Q8VG63 306 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cd209aQ91ZX1 238 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sntg1Q925E1 517 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rap1bQ99JI6 184 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Acss1Q99NB1 682 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Qtrt1Q9JMA2 403 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Adamts5Q9R001 930 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Col4a5Q63ZW6 1691 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ttc6G3UYY4 1857 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 KcpQ3U492 1550 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 2610044O15Rik8A0A087WRJ1 410 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm21936A0A1Y7VJE9 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm5788A0A1Y7VK80 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm5039J3QNT6 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Itga5P11688 1053 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cdh11P55288 796 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm2016Q3TQZ4 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 InipQ3TXT3 104 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm8332Q3UTA4 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gpr39Q5U431 456 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr406Q7TRX0 323 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm5662Q8BX20 144 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Spem2Q8C5U4 503 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Oasl1Q8VI94 511 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Hemk1Q921L7 340 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Psg23Q9D2U0 471 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Psg21Q9DAV5 471 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r172Q9EPS4 313 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nek7Q9ES74 302 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Aqp9Q9JJJ3 295 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Acss2Q9QXG4 701 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dapp1Q9QXT1 280 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tie1Q06806 1134 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Treml2Q2LA85 329 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Riiad1Q3KNY5 119 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Epha6Q62413 1035 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc6a5Q761V0 799 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1167Q7TR26 316 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp189Q8BKP2 608 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc19a3Q99PL8 488 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 D10Jhu81eQ9D172 266 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rtl8cQ9D6I0 112 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Spag4Q9JJF2 443 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 CalcrlQ9R1W5 463 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Srd5a3Q9WUP4 330 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 IsxA1A546 240 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc25a34A2ADF7 318 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp989H3BLB0 661 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 NumblO08919 604 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Wsb2O54929 404 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 CapzbP47757 277 aaKnown RBP11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Scgb1a1Q06318 96 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Poldip3Q8BG81 420 aaKnown RBP11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ptges2Q8BWM0 384 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ska3Q8C263 411 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fbxl3Q8C4V4 428 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r6Q8R2D4 303 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gtpbp8Q9CY28 285 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r10W4VSP8 311 aa11.06□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zar1lC3VD30 291 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1121L7MTT1 314 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 EomesO54839 707 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 P01668 110 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sox18P43680 377 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Crabp1P62965 137 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp36l3Q5ISE2 725 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fmr1nbQ80ZA7 238 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc25a40Q8BGP6 337 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prss27Q8BJR6 328 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Bmt2Q8BXK4 403 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gfod2Q9CYH5 385 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr663A0A1B0GSI9 319 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn2r106E9PY92 862 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr610E9Q598 315 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr294F7CWV4 335 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rdh19G5E8H9 318 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 EllO08856 602 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tle3Q08122 772 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms