RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Zdhhc2P59267 366 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 SnrpgP62309 76 aaKnown RBP13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Dtx3lQ3UIR3 748 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Ifngr2Q63953 332 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Pan3Q640Q5 837 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Olfr1133Q7TR44 313 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Pgm2Q7TSV4 620 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Irf2bplQ8K3X4 775 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Cox4i2Q91W29 172 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Mrgpra7Q91ZC5 305 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 D10Wsu102eQ9CX66 185 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 MmabQ9D273 237 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Pebp4Q9D9G2 242 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Mfsd1Q9DC37 464 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 PpieQ9QZH3 301 aaKnown RBP13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Trpm7Q923J1 1863 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Ighv16-1A0A0A6YW39 117 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Prdm14E9Q3T6 561 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Gm17728E9Q5K2 132 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Rad51dO55230 329 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Tnfrsf1bP25119 474 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Fam180aQ8BR21 173 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Lats1Q8BYR2 1129 aa13.71□□□□□ -0.21
Rtf1-201ENSMUST00000028767 Olfr239A0PK55 315 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr55K7N6Q1 315 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 VipP32648 170 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Sox1P53783 391 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Map3k8Q07174 467 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Cnn2Q08093 305 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 NfkbidQ2TB02 327 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Frg2f1Q6P3A2 227 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Slc35f2Q7TML3 375 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Fam69cQ8BQT2 410 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 B4gat1Q8BWP8 415 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 AcppQ8CE08 381 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr514Q8VFZ6 310 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr160Q8VGE3 309 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Otub2Q9CQX0 234 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Eif3kQ9DBZ5 218 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Cdc40Q9DC48 579 aaKnown RBP13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Stard5Q9EPQ7 213 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Fbxo8Q9QZN3 319 aa13.71□□□□□ -0.22
Rtf1-201ENSMUST00000028767 4930451I11RikE9Q9R3 111 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Vmn2r117K7N6V1 857 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Ikzf2P81183 526 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Crmp1P97427 572 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gm1123Q1RME4 390 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Mmp25Q3U435 615 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Akr7a2Q8CG76 367 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Slc16a14Q8K1C7 512 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr935Q8VG16 308 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Itfg2Q91WI7 443 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 C1qtnf2Q9D8U4 294 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gm14085A2AWR5 660 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Znf296E9Q6W4 445 aaKnown RBP13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Rasd1O35626 280 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Mab21l1O70299 359 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 MbpP04370 250 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Tead1P30051 426 aaKnown RBP13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 PfplQ5RKV8 702 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Tas2r40Q7TQB8 319 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Dcaf12l1Q8CBW4 501 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Il23rQ8K4B4 644 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr668Q8VGW3 318 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Lrch4Q921G6 680 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Mrm1Q99J25 320 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Rassf1Q99MK9 340 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Rab3bQ9CZT8 219 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Slc46a3Q9DC26 460 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Dapp1Q9QXT1 280 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gm28557A0A087WQQ0 336 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr115B2RTB9 312 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gm21103E9Q2Q1 267 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 LcatP16301 438 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr270Q7TS19 314 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Trim69Q80X56 500 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Foxe1Q8R2I0 371 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr54Q8VFE6 313 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Egln3Q91UZ4 239 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Efcab11Q9D0E5 162 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Obp1aQ9D3H2 163 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Pfn4Q9D6I3 129 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Lgi1Q9JIA1 557 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Lpar2Q9JL06 348 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Capn1O35350 713 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 C9P06683 548 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Fgf17P63075 216 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Actc1P68033 377 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Acta1P68134 377 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 C1qaP98086 245 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gpr39Q5U431 456 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Polr2mQ6P6I6 366 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gpr157Q8C206 330 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Olfr658Q8VGV5 323 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Mrpl54Q9CPW3 135 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Cdca4Q9CWM2 237 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Cnot9Q9JKY0 299 aa13.7□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Tanc1Q0VGY8 1856 aa13.69□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Gm8220F6YKI2 213 aa13.69□□□□□ -0.22
Rtf1-201ENSMUST00000028767 Ntrk2P15209 821 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms