RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Slco1a1Q9QXZ6 670 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Foxe3Q9QY14 288 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ggta1l1A2AUQ7 319 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Gm11127A7VMS2 374 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 CK137956B1AYM9 596 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Cdc20bD3Z3I0 519 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Tmem200cJ3QK46 637 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Zfp994J3QM38 661 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Zfp60P16374 707 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Mc3rP33033 323 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ube2mP61082 183 aaKnown RBP11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Polr1dP97304 133 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Alg11Q3TZM9 492 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Lin28bQ45KJ6 247 aaKnown RBP11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slc44a5Q5RJI2 710 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Fam189a1Q6A044 515 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Cxcl3Q6W5C0 100 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 CdnfQ8CC36 187 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 TmieQ8K467 153 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Angptl8Q8R1L8 198 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Defb35Q8R2I3 63 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slc35b3Q922Q5 369 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 1700029P11RikQ9CQ68 150 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Gdpd1Q9CRY7 314 aa11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Trim2Q9ESN6 744 aaKnown RBP11.92□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Plxna1P70206 1894 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1084A0A1L1STZ9 313 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Mpeg1A1L314 713 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Rbbp9O88851 186 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 ChrndP02716 520 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 ChrneP20782 493 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Nr2f6P43136 390 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 EpxP49290 716 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Barhl1P63157 327 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Mtf1Q07243 675 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Lgals3bpQ07797 577 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Gtpbp2Q3UJK4 602 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slc17a4Q5NCM1 492 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 DraxinQ6PAL1 343 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Gramd2bQ6PEM6 445 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Npr2Q6VVW5 1047 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Znf750Q8BH05 703 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Timmdc1Q8BUY5 285 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Tmprss11gQ8BZ10 417 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 H1fntQ8CJI4 398 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Irf2bplQ8K3X4 775 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Med17Q8VCD5 649 aaKnown RBP11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Mrps23Q8VE22 177 aaKnown RBP11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1043Q8VFK4 314 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 PxnQ8VI36 591 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Tmem168Q91VX9 697 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Tmem138Q9D6G5 162 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ceacam18Q9D871 376 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Nox4Q9JHI8 578 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Casp8ap2Q9WUF3 1962 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1025-ps1A0A140T8K3 312 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1095A3KPP7 308 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1511E9PWU0 318 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr1510E9PZZ6 318 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 OpcmlG5E8G3 345 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 9330182O14RikJ3QNB2 140 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 GypaP14220 168 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 PpibP24369 216 aaKnown RBP11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Fv1P70213 459 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Taar7fQ5QD08 358 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Taar7bQ5QD11 358 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Usf2Q64705 346 aaKnown RBP11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Vmn1r87Q8R255 295 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Vmn1r71Q8VIC0 307 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 D10Wsu102eQ9CX66 185 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 EurlQ9D7G4 290 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Actr6Q9D864 396 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Sult1c2Q9D939 296 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ift43Q9DA69 206 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Vmn1r53Q9EP93 310 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr971Q9EQ96 307 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Eci2Q9WUR2 391 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Cdh20Q9Z0M3 801 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ttll3A4Q9E5 927 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Gm21797J3QNW5 180 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slc10a1O08705 362 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 HbzP06467 142 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Kcne1P23299 129 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 SnrpgP62309 76 aaKnown RBP11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Crmp1P97427 572 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Tmem38aQ3TMP8 298 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Nxt2Q3UNA4 142 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slco4c1Q8BGD4 722 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Ahsa1Q8BK64 338 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Slc35f4Q8BZK4 485 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Olfr308Q8VFP2 308 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Mrm1Q99J25 320 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 9530002B09RikQ9EPV7 135 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Pkmyt1Q9ESG9 490 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 ItgaxQ9QXH4 1169 aa11.91□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Zfp937A2ANU7 503 aa11.9□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Vmn2r101E9PZS9 857 aa11.9□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Vmn2r13L7N1X2 831 aa11.9□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Pmm1O35621 262 aa11.9□□□□□ -0.5
Clcn3-201ENSMUST00000004430 Defb43Q30KM9 69 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms