RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mab21l1O70299 359 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Zfand1Q8BFR6 268 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Atg4dQ8BGV9 474 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Pomgnt2Q8BW41 605 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Fam149aQ8CFV2 787 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm42417Q8K1D0 126 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr1312Q8VF10 317 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Clec2dQ91V08 207 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc41a3Q921R8 488 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 4933436I01RikQ9D3T1 429 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Mfsd2aQ9DA75 534 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cdh20Q9Z0M3 801 aa17.37■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cyp4a32A2A8T1 509 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 I0C0044D17RikA6PWL3 169 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tmem240B2RWJ3 173 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Fam84bD3YXJ5 310 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr574F8VQ18 346 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Aldh3b3J3QMK6 479 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Btg1P62325 171 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tead3P70210 439 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Serpina3mQ03734 418 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Mat2aQ3THS6 395 aaKnown RBP17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Nkx6-3Q3UHX8 262 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 H2-Eb2Q3UUV9 287 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 PfplQ5RKV8 702 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Clcn4Q61418 747 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 HlxQ61670 476 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 PnpoQ91XF0 261 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tspan31Q9CQ88 210 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Snapc3Q9D2C9 407 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Lypd2Q9DD23 127 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dapp1Q9QXT1 280 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Phf3B2RQG2 2025 aaKnown RBP17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Creg1O88668 220 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 F10O88947 481 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Nkx2-6P43688 289 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 PitpnaP53810 271 aaKnown RBP17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dppa5bP85965 119 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Mmp7Q10738 264 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tas2r135Q7TQA9 312 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Kiaa0895Q7TQE7 519 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr699Q7TRN3 316 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Klf8Q8BLM0 355 aaKnown RBP17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Csnk1g2Q8BVP5 415 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc1a7Q8JZR4 559 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Coq9Q8K1Z0 313 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 WacQ924H7 646 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tex46Q9CPU3 165 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Steap1Q9CWR7 339 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Susd3Q9D176 269 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tnfrsf21Q9EPU5 655 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Plxnd1Q3UH93 1925 aa17.36■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dok2O70469 412 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 H2-Q7P14429 334 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 H2-Q9P14431 200 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Wnt11P48615 354 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Rps7P62082 194 aaKnown RBP17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Snrpd2P62317 118 aaKnown RBP17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 RykQ01887 594 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Ccdc106Q3ULM0 279 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Sidt1Q6AXF6 827 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Q8BHG2 160 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cox15Q8BJ03 413 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Ces2eQ8BK48 559 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr781Q8VFZ8 311 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Wdr45Q91VM3 360 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Prelid3bQ9CYY7 195 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 C1qtnf2Q9D8U4 294 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dennd6bQ9D9V7 585 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Nox4Q9JHI8 578 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Nup214Q80U93 2085 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc23a4A0A0J9YUX7 615 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Rasgef1aA0A0N4SVR5 498 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm4779A0A1B0GR91 561 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Ttc39aA2ACP1 578 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 5430403G16RikD3Z5L4 667 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Zfp54E9PW05 585 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Spsb2O88838 264 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 P01809 118 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc12a3P59158 1002 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Hectd3Q3U487 861 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Vdac3Q60931 283 aaKnown RBP17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Rbm38Q62176 237 aaKnown RBP17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Vat1Q62465 406 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc36a2Q8BHK3 478 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc25a45Q8CFJ7 288 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr768Q8VGC4 312 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr669Q8VGU9 317 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 GhitmQ91VC9 346 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 P2ry12Q9CPV9 347 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Phyhd1Q9DB26 291 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Arfgap1Q9EPJ9 414 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cacna1eQ61290 2272 aa17.35■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Vmn2r110E9PWD5 858 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm7951E9Q0A2 213 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm6482F6YHC1 213 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm17124F6ZIG1 213 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gpr31F8VQN3 319 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm10338K7N692 204 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dpm1O70152 260 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms