RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Adh7Q64437 374 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Ap5m1Q8BJ63 490 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Cables2Q8K3M5 476 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Adarb1Q91ZS8 711 aaKnown RBP15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Pebp4Q9D9G2 242 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 PtgesQ9JM51 153 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp978A2A7I1 335 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm13078A2AGW8 474 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr601A2RS33 314 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Ptrhd1D3Z4S3 140 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Amd2D3Z6H8 334 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm43720E0CXM8 267 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Arl9F7BE40 171 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Ntrk2P15209 821 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 TpoP35419 914 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 TesP47226 423 aaKnown RBP15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Cdh11P55288 796 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 MazP56671 477 aaKnown RBP15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Htr1fQ02284 366 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Dcst1Q059Y8 732 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Bcl2a1bQ497M6 172 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Klk8Q61955 260 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Avl9Q80U56 649 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Luzp2Q8BGY3 345 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 MkxQ8BIA3 353 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Dlec1Q8BLA1 635 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 DpcdQ8BPA8 203 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Klhl12Q8BZM0 568 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Ncr1Q8C567 325 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Hint3Q9CPS6 165 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Steap1Q9CWR7 339 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Fam69aQ9D6I7 428 aa15.23■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm14862B1AV28 81 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Saxo1B1AXP3 476 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Coq10aE9Q3H6 259 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Fpr-s1O08790 351 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 FkbplO35450 347 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Chrnb1P09690 501 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Apoa2P09813 102 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Cd14P10810 366 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Fabp1P12710 127 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Serpina3mQ03734 418 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 B3gnt6Q3USF0 391 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 TefmQ5SSK3 364 aaKnown RBP15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Pou4f3Q63955 338 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Adam26bQ6IMH6 699 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 IppkQ6P1C1 489 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Efcab3Q80X60 432 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Zc3h10Q8R205 435 aaKnown RBP15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc9a8Q8R4D1 576 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Glb1lQ8VC60 646 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Pcdhb16Q91Y03 802 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Rassf1Q99MK9 340 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Raet1eQ9CZQ6 251 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Adck1Q9D0L4 525 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Susd3Q9D176 269 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Brca2P97929 3329 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Phf3B2RQG2 2025 aaKnown RBP15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Cyp4a32A2A8T1 509 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 TprnA2AI08 749 aaKnown RBP15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp945E9PYM8 794 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm7970L7N271 213 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm7980L7N471 213 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Nipsnap2O55126 281 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 MakQ04859 622 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Fut10Q5F2L2 481 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 HepacamQ640R3 418 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc6a7Q6PGE7 637 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 TifaQ793I8 184 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr699Q7TRN3 316 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr645Q7TRQ1 315 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Pomgnt2Q8BW41 605 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 A730049H05RikQ8C940 139 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Hpf1Q8CFE2 346 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc1a7Q8JZR4 559 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Tor2aQ8R1J9 321 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Slc22a6Q8VC69 545 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr881Q8VF63 314 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr683Q8VGV1 319 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Fam69bQ99ML4 431 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Krt88Q9CPR6 171 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Nkiras2Q9CR56 191 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Phyhd1Q9DB26 291 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Ndrg3Q9QYF9 375 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Dennd4cA6H8H2 1906 aa15.22■□□□□ 0.03
Shh-201ENSMUST00000002708 Rasgef1aA0A0N4SVR5 498 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp937A2ANU7 503 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Spsb2O88838 264 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Teddm2Q208S0 260 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Xrcc1Q60596 631 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Sema4cQ64151 834 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Lats1Q8BYR2 1129 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Mtnr1bQ8CIQ6 364 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 WacQ924H7 646 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Tmem27Q9ESG4 222 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Pkmyt1Q9ESG9 490 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Bco1Q9JJS6 566 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Plce1Q8K4S1 2282 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Igkv15-103A0A140T8P3 115 aa15.21■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm13124A2A752 406 aa15.21■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms