RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 BHLHA15Q7RTS1 189 aaPredicted RBP12.93□□□□□ -0.34
SRRT-219ENST00000641476 TEX37Q96LM6 180 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 CCDC106Q9BWC9 280 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 KCNK9Q9NPC2 374 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 CTPS2Q9NRF8 586 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 AIG1Q9NVV5 245 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
SRRT-219ENST00000641476 CLDN24A6NM45 220 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 SULT2B1O00204 365 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 HMGN4O00479 90 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ATP8B1O43520 1251 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ADAM11O75078 769 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 CD3EP07766 207 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 RYKP34925 604 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 CHRNEQ04844 493 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 STK11Q15831 433 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ADAM5Q6NVV9 412 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 TMPPEQ6ZT21 453 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 GRINAQ7Z429 371 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 HIPK1Q86Z02 1210 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 GOLGA6L1Q8N7Z2 621 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 KBTBD8Q8NFY9 601 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 LILRB1Q8NHL6 650 aaPredicted RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 ZNF563Q8TA94 476 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 HSD17B8Q92506 261 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ZNF75CPQ92670 426 aaPredicted RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 NEUROG1Q92886 237 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ZNF775Q96BV0 537 aaPredicted RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 PAIP2Q9BPZ3 127 aaKnown RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 NGBQ9NPG2 151 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
SRRT-219ENST00000641476 EMC3Q9P0I2 261 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 BTNL2Q9UIR0 455 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 ANK2Q01484 3957 aa12.92□□□□□ -0.34
SRRT-219ENST00000641476 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 CHRM4P08173 479 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 TFPIP10646 304 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 IGHV1-2P23083 117 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 IL12AP29459 219 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
SRRT-219ENST00000641476 CDKN2CP42773 168 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 UFM1P61960 85 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 BSPH1Q075Z2 132 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 GALNT5Q7Z7M9 940 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 ANKFN1Q8N957 763 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 PIWIL2Q8TC59 973 aaKnown RBP12.91□□□□□ -0.34
SRRT-219ENST00000641476 ZG16BQ96DA0 208 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 DNAJA3Q96EY1 480 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 ARL5BQ96KC2 179 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
SRRT-219ENST00000641476 INPP5KQ9BT40 448 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 OR11A1Q9GZK7 315 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 SLC38A1Q9H2H9 487 aa12.91□□□□□ -0.34
SRRT-219ENST00000641476 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.91□□□□□ -0.34
SRRT-219ENST00000641476 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 ZNF716A6NP11 495 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 AP3D1O14617 1153 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 CD5LO43866 347 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 PMS2P2O95744 297 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 PGRP06401 933 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 SOD3P08294 240 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 RPS4Y1P22090 263 aaKnown RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 KCNJ10P78508 379 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 PPA1Q15181 289 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 SYPL1Q16563 259 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 ZNF672Q499Z4 452 aaPredicted RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 HHATQ5VTY9 493 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 ZNF100Q8IYN0 542 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 TRIML2Q8N7C3 387 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 PIGXQ8TBF5 258 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 PNPT1Q8TCS8 783 aaKnown RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 CNOT9Q92600 299 aaKnown RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 PANX1Q96RD7 426 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 REG4Q9BYZ8 158 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 NPAP1Q9NZP6 1156 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
SRRT-219ENST00000641476 MAGED1Q9Y5V3 778 aaPredicted RBP12.9□□□□□ -0.34
SRRT-219ENST00000641476 CADP27708 2225 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms