RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ZNF440Q8IYI8 595 aa22.38■■□□□ 1.17
VEGFA-232ENST00000640653 DYDC1Q8WWB3 177 aa22.38■■□□□ 1.17
VEGFA-232ENST00000640653 KISS1RQ969F8 398 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF300Q96RE9 604 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-232ENST00000640653 CCL19Q99731 98 aa22.38■■□□□ 1.17
VEGFA-232ENST00000640653 USB1Q9BQ65 265 aaKnown RBP22.38■■□□□ 1.17
VEGFA-232ENST00000640653 EMC3Q9P0I2 261 aa22.38■■□□□ 1.17
VEGFA-232ENST00000640653 CFAP73A6NFT4 308 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 BCHEP06276 602 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 MRPL19P49406 292 aaKnown RBP22.37■■□□□ 1.17
VEGFA-232ENST00000640653 ITGADQ13349 1161 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 PDK3Q15120 406 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 GTDC1Q4AE62 458 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 LIN52Q52LA3 116 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 ABLIM2Q6H8Q1 611 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 Q6ZT83 130 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 GALNT5Q7Z7M9 940 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 GOLGA6L1Q8N7Z2 621 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 DDIT4LQ96D03 193 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 PLPPR2Q96GM1 343 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 CACYBPQ9HB71 228 aaKnown RBP22.37■■□□□ 1.17
VEGFA-232ENST00000640653 SLCO1B3Q9NPD5 702 aa22.37■■□□□ 1.17
VEGFA-232ENST00000640653 TMED7-TICAM2A0A0A6YYA0 188 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF814B7Z6K7 855 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 SMPD2O60906 423 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 CCNA2P20248 432 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 HOXC12P31275 282 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 SLC1A3P43003 542 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 MAP2K6P52564 334 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 NKX6-1P78426 367 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-232ENST00000640653 EPS8Q12929 822 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 MAPK11Q15759 364 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 TTMPQ5BVD1 217 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 SHEQ5VZ18 495 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF704Q6ZNC4 412 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-232ENST00000640653 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 PIGXQ8TBF5 258 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 SLC38A5Q8WUX1 472 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 HSD17B8Q92506 261 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 GTF2H4Q92759 462 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF775Q96BV0 537 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-232ENST00000640653 AURKBQ96GD4 344 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-232ENST00000640653 ARL5BQ96KC2 179 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 OR11A1Q9GZK7 315 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 NGBQ9NPG2 151 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 OSGIN1Q9UJX0 560 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 PRDM4Q9UKN5 801 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 TMED7Q9Y3B3 224 aa22.36■■□□□ 1.17
VEGFA-232ENST00000640653 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF469Q96JG9 3925 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-232ENST00000640653 IGKV3D-15A0A087WSY6 115 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ARHGEF9O43307 516 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF208O43345 1280 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 TFPTP0C1Z6 253 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 TACR3P29371 465 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 OR2B6P58173 313 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 TSC22D1Q15714 1073 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ZSWIM7Q19AV6 140 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ALKBH2Q6NS38 261 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF100Q8IYN0 542 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 LRRC75A-AS1Q8N1F1 130 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 WFDC11Q8NEX6 87 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 CCDC28BQ9BUN5 200 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 TMEM181Q9P2C4 612 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 PRSS50Q9UI38 385 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 TRAPPC4Q9Y296 219 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 PCDHB14Q9Y5E9 798 aa22.35■■□□□ 1.17
VEGFA-232ENST00000640653 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 CNOT4O95628 575 aaKnown RBP22.34■■□□□ 1.17
VEGFA-232ENST00000640653 FOSL1P15407 271 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 IDH3AP50213 366 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 LARS2Q15031 903 aaKnown RBP22.34■■□□□ 1.17
VEGFA-232ENST00000640653 SLC2A7Q6PXP3 512 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-232ENST00000640653 VRK2Q86Y07 508 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 P3H2Q8IVL5 708 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 DNAJA3Q96EY1 480 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 TMEM19Q96HH6 336 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 POTEKPQ9BYX7 375 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 PAIP1Q9H074 479 aaKnown RBP22.34■■□□□ 1.17
VEGFA-232ENST00000640653 ARMC7Q9H6L4 198 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 RLIMQ9NVW2 624 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF443Q9Y2A4 671 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-232ENST00000640653 ITPR3Q14573 2671 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 VPS13CQ709C8 3753 aa22.34■■□□□ 1.17
VEGFA-232ENST00000640653 A0A0G2JPF8 293 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 TMEM72A0PK05 275 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 HNRNPCL2B2RXH8 293 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 HNRNPCL3B7ZW38 293 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 GPR171O14626 319 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 HNRNPCL1O60812 293 aaKnown RBP22.33■■□□□ 1.17
VEGFA-232ENST00000640653 THBS1P07996 1170 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 HNRNPCL4P0DMR1 293 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 FADDQ13158 208 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 RNF220Q5VTB9 566 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 HDXQ7Z353 690 aa22.33■■□□□ 1.17
VEGFA-232ENST00000640653 EBF4Q9BQW3 602 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms