RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PTOV1Q86YD1 416 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 RNF215Q9Y6U7 377 aa16.33■□□□□ 0.2
SCARB2-223ENST00000640640 CD27P26842 260 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 CAV3P56539 151 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 SERPINA12Q8IW75 414 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 RIMKLAQ8IXN7 391 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 MRI1Q9BV20 369 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 MAB21L2Q9Y586 359 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 TRBV11-1A0A0K0K1C0 115 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 OPN1LWP04000 364 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 CD3GP09693 182 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 TEAD1P28347 426 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 TACR3P29371 465 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 BSGP35613 385 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 FOLR3P41439 243 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 AKR1D1P51857 326 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 AGBL4Q5VU57 503 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 MED25Q71SY5 747 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 SUN5Q8TC36 379 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 SFXN2Q96NB2 322 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 THAP7Q9BT49 309 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-223ENST00000640640 LTB4R2Q9NPC1 389 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 FER1L6Q2WGJ9 1857 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 ZSCAN5BA6NJL1 495 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 HCRTR1O43613 425 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 CEACAM5P06731 702 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 BMP4P12644 408 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 GRK1Q15835 563 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 NCCRP1Q6ZVX7 275 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-223ENST00000640640 SENP5Q96HI0 755 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-223ENST00000640640 UBQLN3Q9H347 655 aa16.32■□□□□ 0.2
SCARB2-223ENST00000640640 GALR3O60755 368 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 TRIM23P36406 574 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 PTH2RP49190 550 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 CEBPGP53567 150 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 CTU2Q2VPK5 515 aaKnown RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 LCORQ96JN0 433 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 V9GY05 133 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 A0A087WUU8 490 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 GJE1A6NN92 205 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SCRG1O75711 98 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 CD160O95971 181 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 S100A9P06702 114 aaKnown RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SF3A2Q15428 464 aaKnown RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 PRICKLE2Q7Z3G6 844 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 DUSP19Q8WTR2 217 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 MBOAT4Q96T53 435 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SACM1LQ9NTJ5 587 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SOCS6O14544 535 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 GPRIN2O60269 458 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 RAD51DO75771 328 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 AMY2AP04746 511 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 AQP2P41181 271 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 FOXK2Q01167 660 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 POU3F1Q03052 451 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SQSTM1Q13501 440 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 NKAIN4Q8IVV8 208 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ZNF100Q8IYN0 542 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ARL14Q8N4G2 192 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ZNF578Q96N58 590 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 FOXN4Q96NZ1 517 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 CLUP10909 449 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 MAOAP21397 527 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 CNOT9Q92600 299 aaKnown RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 FAM71F1Q96KD3 344 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ZNF471Q9BX82 626 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 C19orf53Q9UNZ5 99 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-223ENST00000640640 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
SCARB2-223ENST00000640640 ATG2BQ96BY7 2078 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 NID1P14543 1247 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 AMY2BP19961 511 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 TRHRP34981 398 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 LRRC28Q86X40 367 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 ADAMTS14Q8WXS8 1223 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 DHRS1Q96LJ7 313 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 SDF2Q99470 211 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 TXNL4BQ9NX01 149 aaKnown RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 CIB4A0PJX0 185 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 OR2A25A4D2G3 310 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 CD1EP15812 388 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 RPS25P62851 125 aaKnown RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 NKAIN2Q5VXU1 208 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 TCTN3Q6NUS6 607 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 NLGN4YQ8NFZ3 816 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 HHLA2Q9UM44 414 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 ALG5Q9Y673 324 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 MTRF1O75570 445 aaKnown RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 PVALBP20472 110 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 MAN2A2P49641 1150 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 AWAT2Q6E213 333 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 OR7E24Q6IFN5 339 aa16.3■□□□□ 0.2
SCARB2-223ENST00000640640 RPL22L1Q6P5R6 122 aaKnown RBP16.3■□□□□ 0.2
SCARB2-223ENST00000640640 TPRA1Q86W33 373 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms