RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 NPIPB8E9PQR5 432 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 H3BSA7 217 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 EI24O14681 340 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ACOX3O15254 700 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 REM1O75628 298 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 SNX4O95219 450 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 CPN1P15169 458 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 UGT2B10P36537 528 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ALDH3A2P51648 485 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 NRG3P56975 720 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 SRYQ05066 204 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 TOP3AQ13472 1001 aaPredicted RBP12.33□□□□□ -0.44
HLA-C-210ENST00000640219 DAG1Q14118 895 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ADGRE4PQ86SQ3 457 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 RIMKLAQ8IXN7 391 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ZNF611Q8N823 705 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 C7orf57Q8NEG2 295 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 OR52E4Q8NGH9 312 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ADAMTS16Q8TE57 1224 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 PPCDCQ96CD2 204 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
HLA-C-210ENST00000640219 OR52E6Q96RD3 313 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ADOQ96SZ5 270 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 PIF1Q9H611 641 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 REEP4Q9H6H4 257 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 METTL7AQ9H8H3 244 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 DNAJB9Q9UBS3 223 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 MAPRE3Q9UPY8 281 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 TMED5Q9Y3A6 229 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 ORC6Q9Y5N6 252 aa12.33□□□□□ -0.44
HLA-C-210ENST00000640219 TRIM64CA6NLI5 447 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 TP53I11O14683 189 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ANKRD28O15084 1053 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 KCNAB3O43448 404 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PLOD3O60568 738 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 LAMP1P11279 417 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 POU2F1P14859 743 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 CDH2P19022 906 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 CCKARP32238 428 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 MPIP34949 423 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PPICP45877 212 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 RNF144AP50876 292 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PRKAG1P54619 331 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 CLDN8P56748 225 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 MTPNP58546 118 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 RPS4XP62701 263 aaKnown RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PSG6Q00889 435 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PDE7AQ13946 482 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 OR5M10Q6IEU7 315 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ANGPTL8Q6UXH0 198 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 IKBIPQ70UQ0 350 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 YRDCQ86U90 279 aaKnown RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 LSRQ86X29 649 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ZDHHC13Q8IUH4 622 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 EPHX4Q8IUS5 362 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 MICU2Q8IYU8 434 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ROBO4Q8WZ75 1007 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 FIG4Q92562 907 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PIK3R3Q92569 461 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ELP4Q96EB1 424 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 FAM120BQ96EK7 910 aaKnown RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 RTN4RQ9BZR6 473 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 MAGIXQ9H6Y5 334 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 DDX18Q9NVP1 670 aaKnown RBP12.32□□□□□ -0.44
HLA-C-210ENST00000640219 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 CLCF1Q9UBD9 225 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 ROS1P08922 2347 aa12.32□□□□□ -0.44
HLA-C-210ENST00000640219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.31□□□□□ -0.44
HLA-C-210ENST00000640219 A0A096LPI6 279 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
HLA-C-210ENST00000640219 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 FAM220BPB1ANY3 271 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 G3V2T6 193 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 C16orf97H3BN30 126 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 PLOD2O00469 737 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 CXCR6O00574 342 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 HS3ST1O14792 307 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
HLA-C-210ENST00000640219 SCO2O43819 266 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 TSPAN2O60636 221 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 IGKV1D-16P01601 117 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 PGRP06401 933 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 THRBP10828 461 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 DRD5P21918 477 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 CHMP24386 653 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 GPC1P35052 558 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 THBS2P35442 1172 aa12.31□□□□□ -0.44
HLA-C-210ENST00000640219 ACVR1BP36896 505 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms