RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	DHX35	Q9H5Z1	703 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PADI1	Q9ULC6	663 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CNTN6	Q9UQ52	1028 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC22A13	Q9Y226	551 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	NFASC	O94856	1347 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072		A0A0G2JN53	185 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	MAGEB17	A8MXT2	336 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SOX1	O00570	391 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	KLK10	O43240	276 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF749	O43361	778 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SYP	P08247	313 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	KCNE1	P15382	129 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	HIST1H1B	P16401	226 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PTPRA	P18433	802 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CD82	P27701	267 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	JAG1	P78504	1218 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CDC42EP1	Q00587	391 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ODF4	Q2M2E3	257 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SMIM21	Q3B7S5	101 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RAB41	Q5JT25	222 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR52W1	Q6IF63	320 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PHF13	Q86YI8	300 aa	Predicted RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	IGDCC3	Q8IVU1	814 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	WDFY1	Q8IWB7	410 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	ADGRF3	Q8IZF5	1079 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C4orf32	Q8N8J7	132 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM116	Q8NCL8	245 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	FAM71C	Q8NEG0	241 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM186	Q96B77	213 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	UPRT	Q96BW1	309 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PYCR2	Q96C36	320 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	C3orf30	Q96M34	536 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	CNN2	Q99439	309 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC30A3	Q99726	388 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM43	Q9BTV4	400 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TRMT61B	Q9BVS5	477 aa	Known RBP	5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	STRADB	Q9C0K7	418 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	DUSP21	Q9H596	190 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	AMBN	Q9NP70	447 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SIX2	Q9NPC8	291 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	SMCO4	Q9NRQ5	59 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RAB6B	Q9NRW1	208 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LRIT1	Q9P2V4	623 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	LPAR3	Q9UBY5	353 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	RNF150	Q9ULK6	438 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	PADI3	Q9ULW8	664 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TECPR2	O15040	1411 aa		5.72	□□□□□ -1.49
NECAP1-222	ENST00000640072	TMEM150B	A6NC51	233 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	GJE1	A6NN92	205 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072		K7ESF4	209 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PLA2G10	O15496	165 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	KDELR3	O43731	214 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ATP6AP2	O75787	350 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	SNAPC5	O75971	98 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZIC2	O95409	532 aa	Predicted RBP	5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	GLUD1	P00367	558 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR8U8	P0C7N1	319 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR8U9	P0C7N5	309 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CERS1	P27544	350 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PIGA	P37287	484 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PSEN2	P49810	448 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	AKR1C2	P52895	323 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	KLF3	P57682	345 aa	Predicted RBP	5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	EEFSEC	P57772	596 aa	Known RBP	5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR2B8P	P59922	312 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	RAP1B	P61224	184 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	BTG1	P62324	171 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	AKR1C1	Q04828	323 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PDCD1	Q15116	288 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	SF3A2	Q15428	464 aa	Known RBP	5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CBWD3	Q5JTY5	395 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CBWD5	Q5RIA9	395 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	SAMD13	Q5VXD3	122 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CD276	Q5ZPR3	534 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	GRINA	Q7Z429	371 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	LYG2	Q86SG7	212 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PIM3	Q86V86	326 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CBWD2	Q8IUF1	395 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	NPAS3	Q8IXF0	933 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	OR8U1	Q8NH10	309 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ZNF675	Q8TD23	568 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ROPN1L	Q96C74	230 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ATXN7L3B	Q96GX2	97 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	SIGLEC11	Q96RL6	698 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	REEP2	Q9BRK0	252 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	CBWD1	Q9BRT8	395 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	MARVELD1	Q9BSK0	173 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PCGF1	Q9BSM1	259 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	SLC38A1	Q9H2H9	487 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	C1orf198	Q9H425	327 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	ASF1B	Q9NVP2	202 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	PCDHB14	Q9Y5E9	798 aa		5.71	□□□□□ -1.49
NECAP1-222	ENST00000640072	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	RAD17	O75943	681 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SCEL	O95171	688 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	F13B	P05160	661 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	UGT2B7	P16662	529 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	PRKACG	P22612	351 aa		5.71	□□□□□ -1.5
NECAP1-222	ENST00000640072	SDC2	P34741	201 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms