RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 CISD1Q9NZ45 108 aaKnown RBP4.85□□□□□ -1.63
PDE4D-229ENST00000638939 PSMC3IPQ9P2W1 217 aaPredicted RBP4.85□□□□□ -1.63
PDE4D-229ENST00000638939 MALT1Q9UDY8 824 aa4.85□□□□□ -1.63
PDE4D-229ENST00000638939 ING1Q9UK53 422 aaPredicted RBP4.85□□□□□ -1.63
PDE4D-229ENST00000638939 EMCNQ9ULC0 261 aa4.85□□□□□ -1.63
PDE4D-229ENST00000638939 MGAT4BQ9UQ53 548 aa4.85□□□□□ -1.63
PDE4D-229ENST00000638939 IGKV3D-15A0A087WSY6 115 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 NPIPB9F8W1W9 429 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 G3V2L1 256 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SLC28A1O00337 649 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ZNF195O14628 629 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 LSM1O15116 133 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SCAMP2O15127 329 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 RIPK2O43353 540 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DNPH1O43598 174 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 EFNA2O43921 213 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SSX4O60224 188 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 RAMP1O60894 148 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 NDUFS7O75251 213 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SEC22BO75396 215 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CRCPO75575 148 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 LYZL6O75951 148 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 NUDT14O95848 222 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 OPN1LWP04000 364 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PROCP04070 461 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 HMGN2P05204 90 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 C8BP07358 591 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DHRS4L1P0CG22 281 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 UBL4AP11441 157 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 GGT1P19440 569 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ATP6V1C1P21283 382 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 IGHV1-2P23083 117 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TTKP33981 857 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 RPL3P39023 403 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 MECP2P51608 486 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PRKAG1P54619 331 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 RPL38P63173 70 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 IRX1P78414 480 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 LASP1Q14847 261 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PDK3Q15120 406 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 STK11Q15831 433 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 KRTAP24-1Q3LI83 254 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CCDC153Q494R4 210 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 KLHL26Q53HC5 615 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ARL13AQ5H913 290 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CFAP157Q5JU67 520 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DCST2Q5T1A1 773 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CCNJQ5T5M9 372 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ZNF544Q6NX49 715 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CDC73Q6P1J9 531 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CBLN3Q6UW01 205 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 LRIG3Q6UXM1 1119 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 Q6ZSR9 355 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TRMT10CQ7L0Y3 403 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 R3HCC1LQ7Z5L2 792 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 MIER2Q8N344 545 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CCNYL1Q8N7R7 359 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CEP112Q8N8E3 955 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CLRN3Q8NCR9 226 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 C1orf162Q8NEQ5 155 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 OR56A1Q8NGH5 318 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 OR2T11Q8NH01 316 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PHOSPHO1Q8TCT1 267 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SFXN5Q8TD22 340 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 OIT3Q8WWZ8 545 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ST8SIA1Q92185 356 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ZNF75CPQ92670 426 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ANP32BQ92688 251 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CDS1Q92903 461 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 MOAP1Q96BY2 351 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 MUCL1Q96DR8 90 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 FAM120BQ96EK7 910 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TNFRSF13CQ96RJ3 184 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DHRS9Q9BPW9 319 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TRMOQ9BU70 441 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 CACNG6Q9BXT2 260 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 NMUR2Q9GZQ4 415 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PIGUQ9H490 435 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TNFRSF12AQ9NP84 129 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 SIRT3Q9NTG7 399 aaPredicted RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 ZCCHC3Q9NUD5 404 aaKnown RBP4.84□□□□□ -1.63
PDE4D-229ENST00000638939 C14orf119Q9NWQ9 140 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 NPAP1Q9NZP6 1156 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 EMC3Q9P0I2 261 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DCDC2Q9UHG0 476 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PRSS50Q9UI38 385 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 B3GALT5Q9Y2C3 310 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
PDE4D-229ENST00000638939 TANC2Q9HCD6 1990 aa4.84□□□□□ -1.64
PDE4D-229ENST00000638939 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 IGHV3-15A0A0B4J1V0 119 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 FAM234BA2RU67 622 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 NDUFS8O00217 210 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 AZIN1O14977 448 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 GSC2O15499 205 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 ZNF264O43296 627 aa4.83□□□□□ -1.64
PDE4D-229ENST00000638939 EIF4E2O60573 245 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms