RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ZNF311Q5JNZ3 666 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 C1orf100Q5SVJ3 147 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 ATL3Q6DD88 541 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 C11orf71Q6IPW1 123 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 ZNF621Q6ZSS3 439 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 TMEM17Q86X19 198 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 NPBQ8NG41 125 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 OR52B4Q8NGK2 314 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 TCTEX1D2Q8WW35 142 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 NDRG1Q92597 394 aaKnown RBP1.7□□□□□ -2.14
CCDC7-211ENST00000638889 RPL3LQ92901 407 aaKnown RBP1.7□□□□□ -2.14
CCDC7-211ENST00000638889 C14orf79Q96F83 325 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 TIMD4Q96H15 378 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 AKR1E2Q96JD6 320 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 HIST1H4GQ99525 98 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 SLC6A7Q99884 636 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 RAB17Q9H0T7 212 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 DHX33Q9H6R0 707 aaKnown RBP1.7□□□□□ -2.14
CCDC7-211ENST00000638889 VCPKMTQ9H867 229 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 LHX9Q9NQ69 397 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 SOHLH2Q9NX45 425 aa1.7□□□□□ -2.14
CCDC7-211ENST00000638889 ATP10DQ9P241 1426 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 IGKV1D-8A0A087WSZ0 117 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 A6NIZ1 184 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 E9PBE3 544 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 JAK2O60674 1132 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SPAG7O75391 227 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 TGFAP01135 160 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 RBMY1CP0DJD4 496 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 PAICSP22234 425 aaKnown RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 OAS2P29728 719 aaKnown RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 KIF5BP33176 963 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 NMUP48645 174 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 KLK7P49862 253 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 NAPAP54920 295 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 RAP1BP61224 184 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 PSG5Q15238 335 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 FAM83EQ2M2I3 478 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 CCDC57Q2TAC2 916 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 NSUN5P1Q3KNT7 163 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 PARP10Q53GL7 1025 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SLC10A5Q5PT55 438 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 NIPAL3Q6P499 406 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 ERASQ7Z444 233 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 GCNT2Q8N0V5 402 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 KIR3DL3Q8N743 410 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 OR51G2Q8NGK0 314 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 PNPT1Q8TCS8 783 aaKnown RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 TSNARE1Q96NA8 513 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 VPS35Q96QK1 796 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 CCNL2Q96S94 520 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 PLA2G12AQ9BZM1 189 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SELENOIQ9C0D9 397 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SMYD3Q9H7B4 428 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 DMAP1Q9NPF5 467 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SMPD3Q9NY59 655 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-211ENST00000638889 SLC25A37Q9NYZ2 338 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 V9GY05 133 aa1.69□□□□□ -2.14
CCDC7-211ENST00000638889 FRMPD4Q14CM0 1322 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 CLSPNQ9HAW4 1339 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 NCAPD2Q15021 1401 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 PDS5BQ9NTI5 1447 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 A0A0G2JN53 185 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 A0A1B0GUL7 405 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 VSTM2BA6NLU5 285 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 VPS26AO75436 327 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 OR4F21O95013 312 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 PLEKP08567 350 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-211ENST00000638889 PNMA6AP0CW24 399 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-211ENST00000638889 TPSB2P20231 275 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 ATP6V1B2P21281 511 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 ADRA1AP35348 466 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 KPNA2P52292 529 aaKnown RBP1.68□□□□□ -2.14
CCDC7-211ENST00000638889 STARD6P59095 220 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 HSF2Q03933 536 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 TPSAB1Q15661 275 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 CTRB2Q6GPI1 263 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 TMIGD1Q6UXZ0 262 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 TPRA1Q86W33 373 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 SNX32Q86XE0 403 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 RNF182Q8N6D2 247 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 OR10G2Q8NGC3 310 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 OR2L8Q8NGY9 312 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 ST8SIA1Q92185 356 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 ARPC1AQ92747 370 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 MYLPFQ96A32 169 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 MRPL38Q96DV4 380 aaKnown RBP1.68□□□□□ -2.14
CCDC7-211ENST00000638889 GPR61Q9BZJ8 451 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 CALHM2Q9HA72 323 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 VAT1LQ9HCJ6 419 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 B9D1Q9UPM9 204 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 MGAT4BQ9UQ53 548 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 TRAPPC4Q9Y296 219 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 ZNF835Q9Y2P0 537 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 KNSTRNQ9Y448 316 aa1.68□□□□□ -2.14
CCDC7-211ENST00000638889 A0A0G2JLM5 398 aa1.67□□□□□ -2.14
CCDC7-211ENST00000638889 MSH4O15457 936 aa1.67□□□□□ -2.14
CCDC7-211ENST00000638889 TPST2O60704 377 aa1.67□□□□□ -2.14
CCDC7-211ENST00000638889 SS18L1O75177 396 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-211ENST00000638889 CA1P00915 261 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms