RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SLC25A37Q9NYZ2 338 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 KLHL9Q9P2J3 617 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 P2RX2Q9UBL9 471 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 OSGIN1Q9UJX0 560 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 CHST2Q9Y4C5 530 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 PCDHB14Q9Y5E9 798 aa15.73■□□□□ 0.11
PNKP-230ENST00000638016 ZFHX3Q15911 3703 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 TMED7-TICAM2A0A0A6YYA0 188 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 NR5A2O00482 541 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 ADAP00813 363 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 IGHV3-9P01782 118 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 TFPTP0C1Z6 253 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 PRG2P13727 222 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 PSMB1P20618 241 aaKnown RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 TACR3P29371 465 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 APOBEC1P41238 236 aaKnown RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 ANXA11P50995 505 aaKnown RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 EPS8Q12929 822 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 ABLIM2Q6H8Q1 611 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 MSRB3Q8IXL7 192 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 SLC43A2Q8N370 569 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 RSPO3Q9BXY4 272 aaPredicted RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 RMND5AQ9H871 391 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 MTHFD2LQ9H903 347 aaPredicted RBP15.72■□□□□ 0.11
PNKP-230ENST00000638016 TMED7Q9Y3B3 224 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 USF3Q68DE3 2245 aa15.72■□□□□ 0.11
PNKP-230ENST00000638016 SETD2Q9BYW2 2564 aaPredicted RBP15.71■□□□□ 0.11
PNKP-230ENST00000638016 SASH3O75995 380 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 DBIP07108 87 aaKnown RBP15.71■□□□□ 0.11
PNKP-230ENST00000638016 IMPDH2P12268 514 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CD99P14209 185 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
PNKP-230ENST00000638016 NTF4P34130 210 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 PAGE3Q5JUK9 113 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 MSANTD1Q6ZTZ1 278 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CMIPQ8IY22 773 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 PEX5LQ8IYB4 626 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CLIP4Q8N3C7 705 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 OR52P1PQ8NH57 321 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 SLC25A43Q8WUT9 341 aaPredicted RBP15.71■□□□□ 0.11
PNKP-230ENST00000638016 DYDC1Q8WWB3 177 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 PLPPR2Q96GM1 343 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 SLC52A3Q9NQ40 469 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CCDC167Q9P0B6 97 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 ZNF443Q9Y2A4 671 aaPredicted RBP15.71■□□□□ 0.11
PNKP-230ENST00000638016 GPR52Q9Y2T5 361 aa15.71■□□□□ 0.11
PNKP-230ENST00000638016 CDHR4A6H8M9 788 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 CFAP73A6NFT4 308 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 ZNF716A6NP11 495 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 CLIC1O00299 241 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 FRS3O43559 492 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 LYZL6O75951 148 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 ACAA2P42765 397 aaKnown RBP15.7■□□□□ 0.1
PNKP-230ENST00000638016 OR3A2P47893 321 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 CRISP3P54108 245 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 OR2B6P58173 313 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 STX1BP61266 288 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 PPP2R2AP63151 447 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 TXNL4AP83876 142 aaKnown RBP15.7■□□□□ 0.1
PNKP-230ENST00000638016 RGNQ15493 299 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 TAB1Q15750 504 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 SFRP5Q5T4F7 317 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 GP6Q9HCN6 339 aa15.7■□□□□ 0.1
PNKP-230ENST00000638016 INTS9Q9NV88 658 aaKnown RBP15.7■□□□□ 0.1
PNKP-230ENST00000638016 PMS2P2O95744 297 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 PPP3CBP16298 524 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 IL32P24001 234 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 MRPL19P49406 292 aaKnown RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 POLR2HP52434 150 aaKnown RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 CSNK2A1P68400 391 aaPredicted RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 HOXC5Q00444 222 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 BNIP2Q12982 314 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 ACKR1Q16570 336 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 LIN52Q52LA3 116 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 BEX5Q5H9J7 111 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 BLOC1S3Q6QNY0 202 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 SEZ6L2Q6UXD5 910 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 ZNF704Q6ZNC4 412 aaPredicted RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 HDXQ7Z353 690 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 MTDHQ86UE4 582 aaKnown RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 COMTD1Q86VU5 262 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 CADM2Q8N3J6 435 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 SPDL1Q96EA4 605 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 CCDC28BQ9BUN5 200 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 IKZF5Q9H5V7 419 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 EDARQ9UNE0 448 aa15.69■□□□□ 0.1
PNKP-230ENST00000638016 SPIN1Q9Y657 262 aaPredicted RBP15.69■□□□□ 0.1
PNKP-230ENST00000638016 A0A096LPI6 279 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 ZNF724A8MTY0 619 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 HMGB1P1B2RPK0 211 aaPredicted RBP15.68■□□□□ 0.1
PNKP-230ENST00000638016 TGDSO95455 350 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 IGHV1-2P23083 117 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 ADSLP30566 484 aaPredicted RBP15.68■□□□□ 0.1
PNKP-230ENST00000638016 HOXC12P31275 282 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 SLC1A3P43003 542 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 FOXG1P55316 489 aaPredicted RBP15.68■□□□□ 0.1
PNKP-230ENST00000638016 AGKQ53H12 422 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 BHLHA15Q7RTS1 189 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms