RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 DCTP40126 519 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 HTR2BP41595 481 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 GRB2P62993 217 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF750Q32MQ0 723 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF813Q6ZN06 617 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 SUMF2Q8NBJ7 301 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 MIB2Q96AX9 1013 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 RAB39BQ96DA2 213 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 SHARPINQ9H0F6 387 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PPA2Q9H2U2 334 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PAQR5Q9NXK6 330 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 LIPT1Q9Y234 373 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 FAM90A27PA6NNH2 459 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 B3GALT4O96024 378 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 SEMG1P04279 462 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 RNF224P0DH78 156 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 DMRTC1Q5HYR2 192 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PAPD5Q8NDF8 572 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF334Q9HCZ1 680 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PTHP01270 115 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 IGHG1P01857 330 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PMP2P02689 132 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 DCDP81605 110 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 LTB4RQ15722 352 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 RDH10Q8IZV5 341 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ACOT4Q8N9L9 421 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 FEVQ99581 238 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 EDEM2Q9BV94 578 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 HPGDSO60760 199 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 TGM6O95932 706 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 S1PR4O95977 384 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC1A3P43003 542 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PARS2Q7L3T8 475 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 NRSN2Q9GZP1 204 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC2A8Q9NY64 477 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 AQP7P3A6NL99 342 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 UBE2G2P60604 165 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 CLEC14AQ86T13 490 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 KDM8Q8N371 416 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 ELOVL3Q9HB03 270 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 INTS6Q9UL03 887 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 PCYT1BQ9Y5K3 369 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 TMEM269A0A1B0GVZ9 245 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 GJA4P35212 333 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 CLDN12P56749 244 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ERVPABLB-1P60509 514 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 TRAM1Q15629 374 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 HIST2H3PS2Q5TEC6 136 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC22A10Q63ZE4 541 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 IMP4Q96G21 291 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 TCTN2Q96GX1 697 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 PCYT2Q99447 389 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 HOXD1Q9GZZ0 328 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 DDX31Q9H8H2 851 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 PPP1R3CQ9UQK1 317 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF443Q9Y2A4 671 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 PHYHO14832 338 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 UGT2B7P16662 529 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SPHARQ15513 63 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ENTPD8Q5MY95 495 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 GDPD3Q7L5L3 318 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ERMP1Q7Z2K6 904 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 CAMKMTQ7Z624 323 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 RBMXL1Q96E39 390 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 MEPEQ9NQ76 525 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 C1orf196B1AJZ1 125 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 F5H5P2 479 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ADPRMQ3LIE5 342 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 KCNJ15Q99712 375 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 NMNAT2Q9BZQ4 307 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 IGKV6D-41A0A0C4DH26 115 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 PBX1P40424 430 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF92Q03936 586 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 TMEM239Q8WW34 195 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 TSPAN11A1L157 253 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SEC14L6B5MCN3 397 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 HTN1P15515 57 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SOX18P35713 384 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 POU4F3Q15319 338 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 EMG1Q92979 244 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 OR7D2Q96RA2 312 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 RIMS3Q9UJD0 308 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 hCG_1809904A0A1W2PP81 198 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 A0A1W2PPE2 198 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 A0A1W2PR64 198 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ABHD16AO95870 558 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 HRH2P25021 359 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 CDC34P49427 236 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 OTPQ5XKR4 325 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 AGBL5Q8NDL9 886 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 FNDC9Q8TBE3 224 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
CACNA1A-227ENST00000636549 ENPP1P22413 925 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms