RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TUSC5Q8IXB3 177 aa16.36■□□□□ 0.21
CLN6-214ENST00000636314 GTF2H4Q92759 462 aa16.36■□□□□ 0.21
CLN6-214ENST00000636314 CACYBPQ9HB71 228 aaKnown RBP16.36■□□□□ 0.21
CLN6-214ENST00000636314 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
CLN6-214ENST00000636314 SULT2B1O00204 365 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 AP3D1O14617 1153 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 SMAD9O15198 467 aaKnown RBP16.35■□□□□ 0.21
CLN6-214ENST00000636314 SMPD2O60906 423 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 ADAM11O75078 769 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 FESP07332 822 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 PPP3CBP16298 524 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 PCSK6P29122 969 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 DIO1P49895 249 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 LIN52Q52LA3 116 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 TFAP2EQ6VUC0 442 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 STAC2Q6ZMT1 411 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 TMPPEQ6ZT21 453 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 NUFIP2Q7Z417 695 aaKnown RBP16.35■□□□□ 0.21
CLN6-214ENST00000636314 CKAP2Q8WWK9 683 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 PIK3IP1Q96FE7 263 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 MAGEB18Q96M61 343 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 PAIP1Q9H074 479 aaKnown RBP16.35■□□□□ 0.21
CLN6-214ENST00000636314 RAD21L1Q9H4I0 556 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 PCDHB14Q9Y5E9 798 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
CLN6-214ENST00000636314 ARID1AO14497 2285 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 A0A096LPI6 279 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 DEFB108AA8MXU0 73 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 H7C1Q1 480 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 SMAD7O15105 426 aaKnown RBP16.34■□□□□ 0.21
CLN6-214ENST00000636314 CYTIPO60759 359 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 YES1P07947 543 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 HTR3AP46098 478 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 RASGEF1BQ0VAM2 473 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 MAPK11Q15759 364 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
CLN6-214ENST00000636314 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 ZNF836Q6ZNA1 936 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 PRIMA1Q86XR5 153 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 ZNF440Q8IYI8 595 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 SLC38A5Q8WUX1 472 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 ZHX1-C8orf76Q96EF9 292 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 TMEM19Q96HH6 336 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 PSD2Q9BQI7 771 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 BCO1Q9HAY6 547 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 JMJD1CQ15652 2540 aa16.34■□□□□ 0.21
CLN6-214ENST00000636314 KIAA1324LA8MWY0 1029 aaPredicted RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 CLIC1O00299 241 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 FAAHO00519 579 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 SIAH2O43255 324 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 TFPTP0C1Z6 253 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 CCNA2P20248 432 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 PSMB1P20618 241 aaKnown RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 FKBP2P26885 142 aaKnown RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 POLR2HP52434 150 aaKnown RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 IRX1P78414 480 aaPredicted RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 EPS8Q12929 822 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 FADDQ13158 208 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 SQLEQ14534 574 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 RGNQ15493 299 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 VRK2Q86Y07 508 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 FUNDC1Q8IVP5 155 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 CIARTQ8N365 385 aaPredicted RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 COX4I2Q96KJ9 171 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 Q96MF0 132 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 MDFIQ99750 246 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 OR11A1Q9GZK7 315 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 ACTR6Q9GZN1 396 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 RLIMQ9NVW2 624 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 ZNF443Q9Y2A4 671 aaPredicted RBP16.33■□□□□ 0.2
CLN6-214ENST00000636314 GPR52Q9Y2T5 361 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 HDGFL3Q9Y3E1 203 aa16.33■□□□□ 0.2
CLN6-214ENST00000636314 TMED7-TICAM2A0A0A6YYA0 188 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 CDHR4A6H8M9 788 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 SASH3O75995 380 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 PMS2P2O95744 297 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 HOXB9P17482 250 aaPredicted RBP16.32■□□□□ 0.2
CLN6-214ENST00000636314 CLK1P49759 484 aaKnown RBP16.32■□□□□ 0.2
CLN6-214ENST00000636314 ATP4BP51164 291 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 LARS2Q15031 903 aaKnown RBP16.32■□□□□ 0.2
CLN6-214ENST00000636314 AGKQ53H12 422 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 ABLIM2Q6H8Q1 611 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 ADGRG3Q86Y34 549 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 DDIT4LQ96D03 193 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 DNAJA3Q96EY1 480 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
CLN6-214ENST00000636314 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 ZNF300Q96RE9 604 aaPredicted RBP16.32■□□□□ 0.2
CLN6-214ENST00000636314 OR10A4Q9H209 315 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 TMEM45AQ9NWC5 275 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 TMED7Q9Y3B3 224 aa16.32■□□□□ 0.2
CLN6-214ENST00000636314 FREM1Q5H8C1 2179 aa16.31■□□□□ 0.2
CLN6-214ENST00000636314 DSCAMO60469 2012 aa16.31■□□□□ 0.2
CLN6-214ENST00000636314 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms