RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ISL1P61371 349 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 KCNC4Q03721 635 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 KEAP1Q14145 624 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 SHQ1Q6PI26 577 aaKnown RBP13.13□□□□□ -0.31
LINC00339-208ENST00000634934 DEF8Q6ZN54 512 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PIK3C3Q8NEB9 887 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 OR2M3Q8NG83 312 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 OR4D11Q8NGI4 311 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 OR6T1Q8NGN1 323 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 OR5W2Q8NH69 310 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 MUL1Q969V5 352 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 NTNG2Q96CW9 530 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 WBP1Q96G27 269 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 TOR3AQ9H497 397 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 LUZP4Q9P127 313 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 ICAM5Q9UMF0 924 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PCDHGB6Q9Y5F9 930 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 IGLV3-32A0A0A0MS00 114 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 LRRC3CA6NJW4 275 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 B4DXG7 233 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 E9PQ18 207 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 hCG_2039718K7EN88 272 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 AP3D1O14617 1153 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 ADAM11O75078 769 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 CST1P01037 141 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 ACVR2AP27037 513 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 SLC6A8P48029 635 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 FOXO1Q12778 655 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 CBFBQ13951 182 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 TOMM20Q15388 145 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-208ENST00000634934 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 SLC6A19Q695T7 634 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PIWIL3Q7Z3Z3 882 aaKnown RBP13.13□□□□□ -0.31
LINC00339-208ENST00000634934 RANBP3LQ86VV4 465 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-208ENST00000634934 OFCC1Q8IZS5 231 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 SPARTQ8N0X7 666 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 FADS6Q8N9I5 356 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF563Q8TA94 476 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 SLC35B4Q969S0 331 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 EVA1AQ9H8M9 152 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
LINC00339-208ENST00000634934 EML6Q6ZMW3 1958 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 PFDN1O60925 122 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 CBR3O75828 277 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 MT-ND1P03886 318 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 SEMG1P04279 462 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 RFPL3SP0C7P2 107 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 PGCP20142 388 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 TCEA1P23193 301 aaKnown RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 YAP1P46937 504 aaKnown RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 IDH2P48735 452 aaKnown RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ENTPD1P49961 510 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF136P52737 540 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 SUMO3P55854 103 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-208ENST00000634934 COPZ1P61923 177 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 CSNK2BP67870 215 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 PMP22Q01453 160 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 MVKQ03426 396 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 NPTX1Q15818 432 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ANKRD13BQ86YJ7 626 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 CADM2Q8N3J6 435 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 MCHR1Q99705 422 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 TTTY12Q9BZ98 90 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 AMBRA1Q9C0C7 1298 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 CTPS2Q9NRF8 586 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 DKKL1Q9UK85 242 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 VDAC3Q9Y277 283 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 NTNG1Q9Y2I2 539 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
LINC00339-208ENST00000634934 FAM47E-STBD1D6RA91 191 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 TRAPPC6AO75865 159 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 C1QL1O75973 258 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 FABP3P05413 133 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 SFTPCP11686 197 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 DPP4P27487 766 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 GDF1P27539 372 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 VLDLRP98155 873 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 QPRTQ15274 297 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 TOMM34Q15785 309 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 EGFL6Q8IUX8 553 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 TEX19Q8NA77 164 aa13.11□□□□□ -0.31
LINC00339-208ENST00000634934 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
LINC00339-208ENST00000634934 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms