RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 EMC9Q9Y3B6 208 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 PCDHGA7Q9Y5G6 932 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 H0YGG7 62 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 MTHFD2P13995 350 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ETV4P43268 484 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 TAS2R31P59538 309 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 CPZQ66K79 652 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF322Q6U7Q0 402 aaPredicted RBP10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ESX1Q8N693 406 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ACBD4Q8NC06 268 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 OR13J1Q8NGT2 312 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ADAMTS16Q8TE57 1224 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF566Q969W8 418 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 V9GY05 133 aa10.99□□□□□ -0.65
SHPRH-211ENST00000629427 HLCSP50747 726 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 CYS1Q717R9 158 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 DTWD1Q8N5C7 304 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 HSD17B8Q92506 261 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 HRASLSQ9HDD0 168 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 C19orf12Q9NSK7 152 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 DNAJC25-GNG10A0A024R161 153 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM269A0A1B0GVZ9 245 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 TOR1AO14656 332 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 IGHEP01854 428 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 CPMP14384 443 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 MAGEA6P43360 314 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 CTSCP53634 463 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 GK2Q14410 553 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 MRPL2Q5T653 305 aaKnown RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 DUSP19Q8WTR2 217 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 WDR83Q9BRX9 315 aaKnown RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF576Q9H609 170 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SNNO75324 88 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SLC34A2O95436 690 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 TCN2P20062 427 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 HLA-FP30511 346 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 F2RL1P55085 397 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SLC7A9P82251 487 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF169Q14929 603 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SSX2Q16385 188 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 RPE65Q16518 533 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SERPINA11Q86U17 422 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 STEAP2Q8NFT2 490 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 OR14A16Q8NHC5 309 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 HAVCR2Q8TDQ0 301 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 HAS2Q92819 552 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SLAMF9Q96A28 289 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 FOXRED1Q96CU9 486 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SAT2Q96F10 170 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 NICN1Q9BSH3 213 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 MRI1Q9BV20 369 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 PITHD1Q9GZP4 211 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ELOVL3Q9HB03 270 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 CACNA1CQ13936 2221 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 AGPAT2O15120 278 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SRPX2O60687 465 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 FGF4P08620 206 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 PTAFRP25105 342 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 PPP5CP53041 499 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF578Q96N58 590 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF225Q9UK10 706 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 NME7Q9Y5B8 376 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 PENKP01210 267 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-211ENST00000629427 CSF1P09603 554 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 GJA4P35212 333 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF252P-AS1Q0IIN9 211 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 COX15Q7KZN9 410 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF595Q8IYB9 648 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 GDPD1Q8N9F7 314 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 OR4N2Q8NGD1 307 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 UPRTQ96BW1 309 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 SLC23A2Q9UGH3 650 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 WDR37Q9Y2I8 494 aa10.98□□□□□ -0.65
SHPRH-211ENST00000629427 DRGXA6NNA5 263 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 BET1O15155 118 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF264O43296 627 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SORBS2O94875 1100 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 C1SP09871 688 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HOXC13P31276 330 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 TRA2BP62995 288 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SMIM15Q7Z3B0 74 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 OR2A12Q8NGT7 310 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SLC41A2Q96JW4 573 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 C1orf198Q9H425 327 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 EGLN3Q9H6Z9 239 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 STEAP1Q9UHE8 339 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CACNG2Q9Y698 323 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ITGB4P16144 1822 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 LOC285095A0A1B0GVY8 99 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 GPR39O43194 453 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 TK1P04183 234 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PRDX3P30048 256 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PLAG1Q6DJT9 500 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF585AQ6P3V2 769 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 FAM174AQ8TBP5 190 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ARL11Q969Q4 196 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms