RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 EFNA3P52797 238 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 MLLT11Q13015 90 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 TAZQ16635 292 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 TMEM176BQ3YBM2 270 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 TSSK4Q6SA08 328 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SLC35F3Q8IY50 421 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 FAM160A2Q8N612 972 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 PIGCQ92535 297 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 NICN1Q9BSH3 213 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 OR51J1Q9H342 316 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 FUOMA2VDF0 154 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 IFNA4P05014 189 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 CD46P15529 392 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 CRHBPP24387 322 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 HLA-DMAP28067 261 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 BDKRB2P30411 391 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 LCN10Q6JVE6 187 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 KIF18BQ86Y91 864 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 OBP2BQ9NPH6 170 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 KRBA1A5PL33 1030 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SIGLEC6O43699 453 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 GASTP01350 101 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 CXADRP78310 365 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 EXOSC6Q5RKV6 272 aaKnown RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SLCO4C1Q6ZQN7 724 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 FAM57BQ71RH2 274 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 DNAJC22Q8N4W6 341 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 OR2T11Q8NH01 316 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SLC38A5Q8WUX1 472 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SSX3Q99909 188 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 METTL15A6NJ78 407 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SUSD5O60279 629 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 LIPCP11150 499 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 FAM111BQ6SJ93 734 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SBSNQ6UWP8 590 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 CD163Q86VB7 1156 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 LRRC18Q8N456 261 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 GATA6Q92908 595 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCN8A-209ENST00000627620 NENFQ9UMX5 172 aa11.94□□□□□ -0.5
SCN8A-209ENST00000627620 SHOXO15266 292 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ALDOBP05062 364 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 MAOAP21397 527 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ZNF91Q05481 1191 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TBCEQ15813 527 aaPredicted RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 Q6ZPB1 254 aaPredicted RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 RNF113BQ8IZP6 322 aaKnown RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 LSMEM2Q8N112 164 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TMEM100Q9NV29 134 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 USP22Q9UPT9 525 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 MT-ND4P03905 459 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 KLKB1P03952 638 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 LPLP06858 475 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 DCAF12Q5T6F0 453 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ADAMTSL4Q6UY14 1074 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 CITO14578 2027 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TNFSF12O43508 249 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ICAM2P13598 275 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TACR3P29371 465 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 OPRD1P41143 372 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 IL13RA1P78552 427 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 AGAP7PQ5VUJ5 663 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 AGAP6Q5VW22 663 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 CLEC14AQ86T13 490 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 SULF2Q8IWU5 870 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 OR14K1Q8NGZ2 314 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 POC1BQ8TC44 478 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 RNF128Q8TEB7 428 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 DUSP19Q8WTR2 217 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 AGAP4Q96P64 663 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 HDAC8Q9BY41 377 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 SLC43A1O75387 559 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 IFNA10P01566 189 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 RPP30P78346 268 aaKnown RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 LTBQ06643 244 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 RPL22L1Q6P5R6 122 aaKnown RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ZNF767PQ75MW2 155 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 NDUFAF7Q7L592 441 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 STEAP2Q8NFT2 490 aa11.93□□□□□ -0.5
SCN8A-209ENST00000627620 ZNF775Q96BV0 537 aaPredicted RBP11.93□□□□□ -0.5
SCN8A-209ENST00000627620 RSPRY1Q96DX4 576 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms