RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 PCYT1BQ9Y5K3 369 aaPredicted RBP12.28□□□□□ -0.44
SIRPA-204ENST00000622179 A3GALT2U3KPV4 340 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ACOD1A6NK06 481 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 MAGEB4O15481 346 aaPredicted RBP12.28□□□□□ -0.44
SIRPA-204ENST00000622179 HCCSP53701 268 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 OLFML2AQ68BL7 652 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ZNF322Q6U7Q0 402 aaPredicted RBP12.28□□□□□ -0.44
SIRPA-204ENST00000622179 LINC00299Q6ZSB3 139 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 PAQR7Q86WK9 346 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ANKRD19PQ9H560 264 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 CUTCQ9NTM9 273 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ZNF224Q9NZL3 707 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 ZNF337Q9Y3M9 751 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 DOCK6Q96HP0 2047 aa12.28□□□□□ -0.44
SIRPA-204ENST00000622179 FXYD6-FXYD2A0A087WZ82 144 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 SERINC4A6NH21 518 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 CTSVO60911 334 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.44
SIRPA-204ENST00000622179 C21orf58P58505 322 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 BTG2P78543 158 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 FBXO42Q6P3S6 717 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 ARL14Q8N4G2 192 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 TMEM99Q8N816 258 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 ZNF511Q8NB15 262 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 CEP76Q8TAP6 659 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 LMF1Q96S06 567 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 TEAD3Q99594 435 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 FXYD6Q9H0Q3 95 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.44
SIRPA-204ENST00000622179 SYNPO2LQ9H987 977 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 DHDHQ9UQ10 334 aa12.27□□□□□ -0.44
SIRPA-204ENST00000622179 C9J4A7 227 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 OR8G3PP0DMU2 310 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 HNRNPFP52597 415 aaKnown RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 CLDN12P56749 244 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 ARFRP1Q13795 201 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 GDPD3Q7L5L3 318 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 PRSS41Q7RTY9 318 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 LSM14AQ8ND56 463 aaKnown RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 BAHD1Q8TBE0 780 aaPredicted RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 PRRG4Q9BZD6 226 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 LYRM4Q9HD34 91 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 SPTBP11277 2137 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 FFAR1O14842 300 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 PAHP00439 452 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 CHRNB1P11230 501 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 GTF2F2P13984 249 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 ABHD4Q8TB40 342 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 RANGRFQ9HD47 186 aaPredicted RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 EPHA6Q9UF33 1036 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 TMEM129A0AVI4 362 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 TMEM72A0PK05 275 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 NPIPB8E9PQR5 432 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 GALR3O60755 368 aaPredicted RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 CTNSO60931 367 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 H2BFMP0C1H6 154 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 HMGA2P52926 109 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 FGL2Q14314 439 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 KCNAB1Q14722 419 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 WBP2NLQ6ICG8 309 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 CCDC71Q8IV32 467 aaPredicted RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 NAXEQ8NCW5 288 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 SLC25A46Q96AG3 418 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
SIRPA-204ENST00000622179 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 UPB1Q9UBR1 384 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 HS3ST3A1Q9Y663 406 aa12.27□□□□□ -0.45
SIRPA-204ENST00000622179 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 LRRTM2O43300 516 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 HYAL3O43820 417 aaPredicted RBP12.26□□□□□ -0.45
SIRPA-204ENST00000622179 MAKP20794 623 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ART1P52961 327 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 PSMA6P60900 246 aaKnown RBP12.26□□□□□ -0.45
SIRPA-204ENST00000622179 PSPHP78330 225 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 TEKQ02763 1124 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 HYAL1Q12794 435 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 SF3A2Q15428 464 aaKnown RBP12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ZMAT1Q5H9K5 638 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ARMC10Q8N2F6 343 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 MR1Q95460 341 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ZNF304Q9HCX3 659 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 MMP17Q9ULZ9 603 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 EXO1Q9UQ84 846 aaKnown RBP12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ZNF264O43296 627 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 DPM1O60762 260 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 ANXA3P12429 323 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 COL9A1P20849 921 aa12.26□□□□□ -0.45
SIRPA-204ENST00000622179 TRHRP34981 398 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms