RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TBRG1Q3YBR2 411 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MZT2BQ6NZ67 158 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SFXN4Q6P4A7 337 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ARL9Q6T311 187 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SSX6Q7RTT6 188 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 GATAD2AQ86YP4 633 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SYS1Q8N2H4 156 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 MS4A15Q8N5U1 240 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ZNF615Q8N8J6 731 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ZSCAN1Q8NBB4 408 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 FAM71CQ8NEG0 241 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 OR6C4Q8NGE1 309 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ENKURQ8TC29 256 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RNF170Q96K19 258 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 ART5Q96L15 291 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 RBCK1Q9BYM8 510 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SLC19A3Q9BZV2 496 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TP63Q9H3D4 680 aaPredicted RBP8.67□□□□□ -1.02
PDPN-212ENST00000621990 Q9N2J8 555 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 HCN3Q9P1Z3 774 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 CYP8B1Q9UNU6 501 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 SLCO1B1Q9Y6L6 691 aa8.67□□□□□ -1.02
PDPN-212ENST00000621990 TRIOO75962 3097 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 TRAV1-2A0A0B4J238 106 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 OGG1O15527 345 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 LYRM1O43325 122 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 TRIM3O75382 744 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 OR2T7P0C7T2 308 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 PRKAR1AP10644 381 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 NPR2P20594 1047 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 RBMS1P29558 406 aaKnown RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 OR12D2P58182 307 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 DBPQ10586 325 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 SRSF5Q13243 272 aaKnown RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 C1orf61Q13536 156 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 QPRTQ15274 297 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 KLHL26Q53HC5 615 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ZNF614Q8N883 585 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 BCORP1Q8N888 145 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CYB561A3Q8NBI2 242 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 OR2T27Q8NH04 317 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 OR5J2Q8NH18 312 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 C16orf52Q8NHV5 167 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 DGAT2Q96PD7 388 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CCNL2Q96S94 520 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 GPX7Q96SL4 187 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 MARVELD1Q9BSK0 173 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CHRNA10Q9GZZ6 450 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ZCCHC4Q9H5U6 513 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 USP34Q70CQ2 3546 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 FAM172BPA6NC97 362 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 SERINC4A6NH21 518 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 B4DGG1 531 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 C2CD4DB7Z1M9 353 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ARPC3O15145 178 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 PPM1BO75688 479 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 TFP02787 698 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 HIST1H1CP16403 213 aaKnown RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 ALAS2P22557 587 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 SHC1P29353 583 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ADH7P40394 386 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 SLC16A1P53985 500 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CLDN20P56880 219 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 HSD17B7P56937 341 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ACTA2P62736 377 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ACTG2P63267 376 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CDONQ4KMG0 1287 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 IDNKQ5T6J7 187 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 FNDC7Q5VTL7 733 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 PLET1Q6UQ28 207 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 DPY19L2P2Q6ZN68 376 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CEACAM19Q7Z692 300 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 OR14A16Q8NHC5 309 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 SGTBQ96EQ0 304 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 ERMAPQ96PL5 475 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 NMNAT2Q9BZQ4 307 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 CAPN10Q9HC96 672 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 MKKSQ9NPJ1 570 aaPredicted RBP8.66□□□□□ -1.02
PDPN-212ENST00000621990 PRTFDC1Q9NRG1 225 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 NPFFR2Q9Y5X5 522 aa8.66□□□□□ -1.02
PDPN-212ENST00000621990 A0A0G2JMP0 313 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 A0A0X1KG70 313 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 FITM1A5D6W6 292 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 LILRA5A6NI73 299 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 MCIDASD6RGH6 385 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 J3QLW9 94 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 CLDN4O14493 209 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 IDH3BO43837 385 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 CSF2P04141 144 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 GYPBP06028 91 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 ZNF19P17023 458 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 BTG2P78543 158 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 ZNF267Q14586 743 aaPredicted RBP8.65□□□□□ -1.02
PDPN-212ENST00000621990 FAM27D1Q5T7N8 215 aa8.65□□□□□ -1.02
PDPN-212ENST00000621990 Q6ZS52 159 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms