RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MNAT1P51948 309 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 PER3P56645 1201 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CEACAM7Q14002 265 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 PON3Q15166 354 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 RIPPLY2Q5TAB7 128 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TMEM211Q6ICI0 200 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 MRGPRGQ86SM5 289 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 ATG4DQ86TL0 474 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 FNDC9Q8TBE3 224 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 RASSF5Q8WWW0 418 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 RND1Q92730 232 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 OR11A1Q9GZK7 315 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TMED7Q9Y3B3 224 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 A0A1B0GWA3 101 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 AQP8O94778 261 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 THY1P04216 161 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 TCN1P20061 433 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-217ENST00000621474 KLK2P20151 261 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 MSX2P35548 267 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-217ENST00000621474 COPZ1P61923 177 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 SELENOWP63302 87 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 MXRA7P84157 204 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 BNIP2Q12982 314 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 CYBRD1Q53TN4 286 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 C6orf89Q6UWU4 347 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 CCDC71Q8IV32 467 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-217ENST00000621474 LIX1LQ8IVB5 337 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 SLC26A7Q8TE54 656 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 SLC25A43Q8WUT9 341 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-217ENST00000621474 WNT2BQ93097 391 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 SLC7A6OSQ96CW6 309 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-217ENST00000621474 DNAJA3Q96EY1 480 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 PCDHAC1Q9H158 963 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 C1orf21Q9H246 121 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 NDE1Q9NXR1 346 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 KLHL28Q9NXS3 571 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 STOML1Q9UBI4 398 aa12.83□□□□□ -0.36
CBWD3-217ENST00000621474 A0A0B4J2E0 115 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 A0A1B0GX12 115 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 GJE1A6NN92 205 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF208O43345 1280 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 NPIPB7O75200 414 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 CLDN1O95832 211 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 CCNA2P20248 432 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 AGAP20933 346 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 RPS3AP61247 264 aaKnown RBP12.82□□□□□ -0.36
CBWD3-217ENST00000621474 EGR4Q05215 589 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 FOXF2Q12947 444 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.36
CBWD3-217ENST00000621474 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF239Q16600 458 aaKnown RBP12.82□□□□□ -0.36
CBWD3-217ENST00000621474 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 VTCN1Q7Z7D3 282 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF808Q8N4W9 903 aaPredicted RBP12.82□□□□□ -0.36
CBWD3-217ENST00000621474 OR52E4Q8NGH9 312 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 VANGL1Q8TAA9 524 aaPredicted RBP12.82□□□□□ -0.36
CBWD3-217ENST00000621474 OSTF1Q92882 214 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 SDCCAG3Q96C92 435 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 RNF122Q9H9V4 155 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 SERINC1Q9NRX5 453 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 SH3GLB1Q9Y371 365 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF175Q9Y473 711 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 FREM1Q5H8C1 2179 aa12.82□□□□□ -0.36
CBWD3-217ENST00000621474 FMO6PO60774 539 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 RCBTB2O95199 551 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 SERPINA1P01009 418 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 OR1E2P47887 323 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 DIO1P49895 249 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 MYBPHQ13203 477 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 SAMD4BQ5PRF9 694 aaKnown RBP12.81□□□□□ -0.36
CBWD3-217ENST00000621474 GLYATQ6IB77 296 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 TMPPEQ6ZT21 453 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 CARM1Q86X55 608 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 GCNT2Q8N0V5 402 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 OR5B2Q96R09 309 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 MCHR1Q99705 422 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF559Q9BR84 538 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 PAQR5Q9NXK6 330 aaPredicted RBP12.81□□□□□ -0.36
CBWD3-217ENST00000621474 SLC13A4Q9UKG4 626 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 BAG5Q9UL15 447 aa12.81□□□□□ -0.36
CBWD3-217ENST00000621474 IGKV1D-42A0A075B6H8 117 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 TNFSF13O75888 250 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 LYPD3O95274 346 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 IFNA14P01570 189 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 IL2RAP01589 272 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 IMPDH2P12268 514 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ENPP1P22413 925 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SLC7A1P30825 629 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 MAP2K6P52564 334 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms