RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 THSD1Q9NS62 852 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 RABL2AQ9UBK7 228 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 RABL2BQ9UNT1 228 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 TMED7Q9Y3B3 224 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 LSM5Q9Y4Y9 91 aaKnown RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 IGHV3-20A0A0C4DH32 117 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 HBA1P69905 142 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 GGTA1PQ4G0N0 100 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SLC22A6Q4U2R8 563 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF684Q5T5D7 378 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF322Q6U7Q0 402 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SBSNQ6UWP8 590 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 FAM83HQ6ZRV2 1179 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 MEPCEQ7L2J0 689 aaKnown RBP10.6□□□□□ -0.71
CLIP1-219ENST00000620786 SLC37A2Q8TED4 501 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 PCDHGA1Q9Y5H4 931 aa10.6□□□□□ -0.71
CLIP1-219ENST00000620786 RAB15P59190 212 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 HYAL4Q2M3T9 481 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PHIPQ8WWQ0 1821 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PRAMEF25A6NGN4 478 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TNFRSF10CO14798 259 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ENSAO43768 121 aaKnown RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ITGB2P05107 769 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MSL3P1P0C860 447 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MEX3BQ6ZN04 569 aaKnown RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SGPP2Q8IWX5 399 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PSMF1Q92530 271 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 EGLN2Q96KS0 407 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SORT1Q99523 831 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ABCG5Q9H222 651 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ELOVL3Q9HB03 270 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 HSPB11Q9Y547 144 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 GPR45Q9Y5Y3 372 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 DENRO43583 198 aaKnown RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 HMGA1P17096 107 aaKnown RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 S100PP25815 95 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 DEFB109BQ30KR1 87 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 OR7E24Q6IFN5 339 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TSSK4Q6SA08 328 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 C5orf46Q6UWT4 87 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 OR13C2Q8NGS9 318 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SYNPRQ8TBG9 265 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM181Q9P2C4 612 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 CD300LBA8K4G0 201 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 J3KTA2 159 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TNFSF15O95150 251 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MT-CO2P00403 227 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ADH6P28332 368 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ERP29P30040 261 aaKnown RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 HLCSP50747 726 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 IL10RAQ13651 578 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PGGHGQ32M88 737 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TBRG1Q3YBR2 411 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SLC6A19Q695T7 634 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MARCH3Q86UD3 253 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SIRT6Q8N6T7 355 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 OR5T1Q8NG75 326 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 PHB2Q99623 299 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 LOXL2Q9Y4K0 774 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 OR7A17O14581 309 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 IL2RGP31785 369 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SPOCK1Q08629 439 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 TPRA1Q86W33 373 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 FOXRED1Q96CU9 486 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
CLIP1-219ENST00000620786 A0A1B0GV50 99 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 H0YIV9 168 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 H7C1C5 153 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MYF6P23409 242 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 LCN6P62502 163 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 KEAP1Q14145 624 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
CLIP1-219ENST00000620786 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
CLIP1-219ENST00000620786 TMEM163Q8TC26 289 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 H1FXQ92522 213 aaKnown RBP10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SULT4A1Q9BR01 284 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 DUSP13Q9UII6 198 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 TCHHQ07283 1943 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MYH4Q9Y623 1939 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 NRAPQ86VF7 1730 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 TRAV36DV7A0A075B6V5 113 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 K7ESM1 405 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 MSR1P21757 451 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 BIDP55957 195 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLC5A12Q1EHB4 618 aa10.58□□□□□ -0.72
CLIP1-219ENST00000620786 SLCO4C1Q6ZQN7 724 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms