RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 COL21A1Q96P44 957 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PFDN4Q9NQP4 134 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 DOCK7Q96N67 2140 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 LOC100506127A0A0U1RQW1 187 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SMIM23A6NLE4 172 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TCP11X1B4DZS4 312 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 GCM2O75603 506 aaPredicted RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 KCNK2O95069 426 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 BRI3O95415 125 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 DIRAS3O95661 229 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 LDLRP01130 860 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 GBAP04062 536 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CYP4B1P13584 511 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 GRK5P34947 590 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 MPIP34949 423 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 MC3RP41968 323 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CDKN2CP42773 168 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CA7P43166 264 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CCR9P51686 369 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 C2orf80Q0P641 193 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SKP2Q13309 424 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FGFBP1Q14512 234 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 NRN1LQ496H8 165 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 RTL6Q6ICC9 239 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ERICH5Q6P6B1 374 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SEM1Q6ZVN7 128 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CLVS1Q8IUQ0 354 aaPredicted RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 MISPQ8IVT2 679 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FAM109AQ8N4B1 249 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ANGPTL6Q8NI99 470 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FANK1Q8TC84 345 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TNFRSF14Q92956 283 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 KLHL29Q96CT2 875 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TTTY12Q9BZ98 90 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PCDHAC1Q9H158 963 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SACM1LQ9NTJ5 587 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 H2AFY2Q9P0M6 372 aaPredicted RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 PUS1Q9Y606 427 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDH11-219ENST00000619158 APC2O95996 2303 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TMEM210A6NLX4 147 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 HMGN4O00479 90 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 WISP2O76076 250 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 C1QCP02747 245 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 INHBBP09529 407 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TFPTP0C1Z6 253 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 COX7A2P14406 83 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 NT5EP21589 574 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CAPGP40121 348 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PSMB10P40306 273 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CCL11P51671 97 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SMSP52788 366 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PRR20EP86478 221 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PRR20CP86479 221 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PRR20DP86480 221 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PRR20BP86481 221 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PRR20AP86496 221 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 LGALS3BPQ08380 585 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PMS2P3Q13401 168 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ZNF829Q3KNS6 432 aaPredicted RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 RIPPLY2Q5TAB7 128 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ATPAF1Q5TC12 328 aaPredicted RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 TYW3Q6IPR3 259 aaKnown RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 FRRS1Q6ZNA5 592 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FKBP9P1Q75LS8 142 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 LINC00518Q8N0U6 118 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 KLHL36Q8N4N3 616 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FAM57AQ8TBR7 257 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 GRHL3Q8TE85 626 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PPWD1Q96BP3 646 aaKnown RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 PPCDCQ96CD2 204 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 OMA1Q96E52 524 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 PSMG3-AS1Q96PY0 264 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 DHRS9Q9BPW9 319 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 EBF4Q9BQW3 602 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 UTP23Q9BRU9 249 aaKnown RBP4.78□□□□□ -1.64
CDH11-219ENST00000619158 KRT84Q9NSB2 600 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 TAS2R9Q9NYW1 312 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 FLRT3Q9NZU0 649 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CLCF1Q9UBD9 225 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ICAM5Q9UMF0 924 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 WIF1Q9Y5W5 379 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 ZNF780BQ9Y6R6 833 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 CHD8Q9HCK8 2581 aa4.78□□□□□ -1.64
CDH11-219ENST00000619158 A0A087WZY1 265 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 BBIP1A8MTZ0 92 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 ZIC3O60481 467 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 UGT2B11O75310 529 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
CDH11-219ENST00000619158 PRB1P04280 392 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 KRT16P08779 473 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 ITGA3P26006 1051 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 ELK4P28324 431 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 CEACAM8P31997 349 aaPredicted RBP4.77□□□□□ -1.65
CDH11-219ENST00000619158 SLC9A3P48764 834 aa4.77□□□□□ -1.65
CDH11-219ENST00000619158 SUCLG1P53597 346 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms