RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ECHDC2Q86YB7 292 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 CEND1Q8N111 149 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 GPR137CQ8N3F9 429 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ZSCAN4Q8NAM6 433 aaPredicted RBP1.74□□□□□ -2.13
TARDBP-220ENST00000618606 CATSPER1Q8NEC5 780 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 SDR9C7Q8NEX9 313 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 RAB3IL1Q8TBN0 382 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 FNDC8Q8TC99 324 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ARNTL2Q8WYA1 636 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ST8SIA1Q92185 356 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ELSPBP1Q96BH3 223 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 RASD2Q96D21 266 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 FAM122AQ96E09 287 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 TIMD4Q96H15 378 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 C12orf42Q96LP6 360 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 C19orf43Q9BQ61 176 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 SLC30A2Q9BRI3 323 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 CHRDL1Q9BU40 450 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 TRIM62Q9BVG3 475 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 TM2D1Q9BX74 207 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 DUSP16Q9BY84 665 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 AZI2Q9H6S1 392 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ELL3Q9HB65 397 aaPredicted RBP1.74□□□□□ -2.13
TARDBP-220ENST00000618606 CRLF2Q9HC73 371 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 MCCC2Q9HCC0 563 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 SLC2A6Q9UGQ3 507 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 ZNF639Q9UID6 485 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 RNF24Q9Y225 148 aa1.74□□□□□ -2.13
TARDBP-220ENST00000618606 AK6Q9Y3D8 172 aaKnown RBP1.74□□□□□ -2.13
TARDBP-220ENST00000618606 GTF3C1Q12789 2109 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 TNRQ92752 1358 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 TTC21BQ7Z4L5 1316 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 TRBV7-9A0A0J9YWB2 115 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 A0A0U1RQS6 177 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FAM240BA0A1B0GVZ2 78 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 BOLA2-SMG1P6H3BVE0 249 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RGS16O15492 202 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 TAPBPO15533 448 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 LATO43561 262 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RNF13O43567 381 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 DFNA5O60443 496 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RAMP3O60896 148 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FOXH1O75593 365 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 UPK3AO75631 287 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 DIRAS1O95057 198 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 NUDT14O95848 222 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 IGLV1-47P01700 117 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 SLC2A3P11169 496 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 BCKDHAP12694 445 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 H2AFXP16104 143 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 GALP22466 123 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ACVR1BP36896 505 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 EFNB2P52799 333 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ATP5IP56385 69 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RPL23AP62750 156 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OTUD4Q01804 1114 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 NCBP1Q09161 790 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RAB40BQ12829 278 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ZNF154Q13106 437 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 IL18R1Q13478 541 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 LAGE3Q14657 143 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 GANABQ14697 944 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 SFT2D3Q587I9 215 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 DMRTC1Q5HYR2 192 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 CTSL3PQ5NE16 218 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR8G2PQ6IF36 304 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FAM199XQ6PEV8 388 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 METAP1DQ6UB28 335 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 CLEC2AQ6UVW9 174 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 APTXQ7Z2E3 356 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OFCC1Q8IZS5 231 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR2L13Q8N349 312 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 KIR3DL3Q8N743 410 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 NECAB1Q8N987 351 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 CCDC148Q8NFR7 591 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR6C4Q8NGE1 309 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR4D9Q8NGE8 314 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR1L6Q8NGR2 347 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 OR9A4Q8NGU2 314 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 SLC2A14Q8TDB8 520 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ADAMTS16Q8TE57 1224 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 C10orf35Q96D05 121 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 C7orf34Q96L11 122 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RBM14Q96PK6 669 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 PANX1Q96RD7 426 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FMO2Q99518 471 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 COPS8Q99627 209 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FEM1AQ9BSK4 669 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 NUP58Q9BVL2 599 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 SPATA16Q9BXB7 569 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 FAM192AQ9GZU8 254 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ANKRA2Q9H9E1 313 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ISG20L2Q9H9L3 353 aaKnown RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 PAK1IP1Q9NWT1 392 aaPredicted RBP1.73□□□□□ -2.13
TARDBP-220ENST00000618606 RAB20Q9NX57 234 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 ELOVL2Q9NXB9 296 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 TMEM9Q9P0T7 183 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 GALPQ9UBC7 116 aa1.73□□□□□ -2.13
TARDBP-220ENST00000618606 PRODH2Q9UF12 536 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms