RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TEKQ02763 1124 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 PLAC9Q5JTB6 97 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 DTWD1Q8N5C7 304 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 GCDHQ92947 438 aaPredicted RBP14.14□□□□□ -0.15
COL5A1-208ENST00000618395 OR10A5Q9H207 317 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ISYNA1Q9NPH2 558 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 C1GALT1Q9NS00 363 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 ACOXLQ9NUZ1 547 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 GOLT1BQ9Y3E0 138 aa14.14□□□□□ -0.15
COL5A1-208ENST00000618395 HIDE1A8MVS5 230 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 RGS11O94810 467 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF17P17021 662 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PRPS1P60891 318 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 CHAC2Q8WUX2 184 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SIDT1Q9NXL6 827 aaKnown RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ETV7Q9Y603 341 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 GDF5P43026 501 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 DHPSP49366 369 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF90Q03938 601 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SGCAQ16586 387 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SOCS4Q8WXH5 440 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 UBQLN4Q9NRR5 601 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 GIMAP2Q9UG22 337 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 A0A0A6YYJ9 748 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 TEX50A0A1B0GTY4 177 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 M0R3H8 397 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 NDUFV1P49821 464 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ECM1Q16610 540 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 CATSPERGQ6ZRH7 1159 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 DPH2Q9BQC3 489 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SALL3Q9BXA9 1300 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 AP4M1O00189 453 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ACSM4P0C7M7 580 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PLK5Q496M5 336 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 FAM209BQ5JX69 171 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ZDHHC14Q8IZN3 488 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 M1APQ8TC57 530 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 GJE1A6NN92 205 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 T-ENOLP0DO92 83 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 UBL4AP11441 157 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 DTYMKP23919 212 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PIN1Q13526 163 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SLC5A12Q1EHB4 618 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 TECRLQ5HYJ1 363 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF573Q86YE8 665 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SAT2Q96F10 170 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PRR11Q96HE9 360 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 GORASP2Q9H8Y8 452 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 RPH3ALQ9UNE2 315 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 STRAPQ9Y3F4 350 aaKnown RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PCGF2P35227 344 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 EXOSC6Q5RKV6 272 aaKnown RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 TRAPPC6BQ86SZ2 158 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 TMEM156Q8N614 296 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 LMAN1LQ9HAT1 526 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 PCDHB10Q9UN67 800 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 H3BQ06 376 aaPredicted RBP14.13□□□□□ -0.15
COL5A1-208ENST00000618395 B4GALT5O43286 388 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 CD81P60033 236 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SELENOWP63302 87 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 P2RY14Q15391 338 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 CPNE8Q86YQ8 564 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 SPTSSAQ969W0 71 aa14.13□□□□□ -0.15
COL5A1-208ENST00000618395 ZNF727A8MUV8 499 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 BMPR1BO00238 502 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SIGLEC6O43699 453 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 FGF19O95750 216 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 CSTAP01040 98 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SHMT2P34897 504 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 BMPR1AP36894 532 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 LILRB1Q8NHL6 650 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-208ENST00000618395 NETO1Q8TDF5 533 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 PNMTP11086 282 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 TACR2P21452 398 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OR4K13Q8NH42 304 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OR52P1PQ8NH57 321 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OCEL1Q9H607 264 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 ELOVL2Q9NXB9 296 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-208ENST00000618395 EMP3P54852 163 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SNU13P55769 128 aaKnown RBP14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OR13C5Q8NGS8 318 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 BORCS6Q96GS4 357 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 NUMBLQ9Y6R0 609 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SLC16A7O60669 478 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 GNSP15586 552 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 ACKR3P25106 362 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SLC16A13Q7RTY0 426 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 ABHD12BQ7Z5M8 362 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-208ENST00000618395 TMEM217Q8N7C4 229 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 NUP43Q8NFH3 380 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OR9K2Q8NGE7 335 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OR1J2Q8NGS2 313 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 TMEM231Q9H6L2 316 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 OARD1Q9Y530 152 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 SCAMP2O15127 329 aaKnown RBP14.12□□□□□ -0.15
COL5A1-208ENST00000618395 MPPED1O15442 326 aa14.12□□□□□ -0.15
COL5A1-208ENST00000618395 ADARB1P78563 741 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms