RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CSF3RQ99062 836 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 HDHD5Q9BXW7 423 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 CTSVO60911 334 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CDK1P06493 297 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 CELA2BP08218 269 aaPredicted RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 BMP1P13497 986 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 ARHGAP11BQ3KRB8 267 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 SCGB2B2Q4G0G5 96 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 C1orf94Q6P1W5 598 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 LRFN4Q6PJG9 635 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 HRASLS5Q96KN8 279 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 NOP16Q9Y3C1 178 aaKnown RBP12.87□□□□□ -0.35
CIITA-213ENST00000618327 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
CIITA-213ENST00000618327 A6NL46 340 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 FOXD2O60548 495 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 IFNA21P01568 189 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 NXPH1P58417 271 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 E2F1Q01094 437 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 ILKQ13418 452 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 GDF7Q7Z4P5 450 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 STT3BQ8TCJ2 826 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 METTL8Q9H825 291 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 TRAV6A0A075B6T7 132 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 IGHV3-20A0A0C4DH32 117 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 SULT2B1O00204 365 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CD1EP15812 388 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 TACR3P29371 465 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 C21orf33P30042 268 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 NCS1P62166 190 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 GXYLT1Q4G148 440 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 ZNF793Q6ZN11 406 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 PIWIL3Q7Z3Z3 882 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 INIPQ9NRY2 104 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 SLC6A13Q9NSD5 602 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 KLF15Q9UIH9 416 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 A0A1W2PPK0 400 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 A6NHS1 94 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 IDSB3KWA1 339 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 PHYHO14832 338 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CD8BP10966 210 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 NID1P14543 1247 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 GADD45AP24522 165 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 RPS5P46782 204 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 RIDAP52758 137 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 ZNF101Q8IZC7 436 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 MS4A15Q8N5U1 240 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 ALG8Q9BVK2 526 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 NUP214P35658 2090 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 LOC100509620A0A075B734 347 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 DSCR3O14972 297 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CCNOP22674 350 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 OCLNQ16625 522 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 KDM4DQ6B0I6 523 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 SLC18B1Q6NT16 456 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 MISPQ8IVT2 679 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 FOXRED2Q8IWF2 684 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CMIPQ8IY22 773 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 STOML3Q8TAV4 291 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CNOT9Q92600 299 aaKnown RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 MSLNLQ96KJ4 702 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 ZNF350Q9GZX5 532 aa12.86□□□□□ -0.35
CIITA-213ENST00000618327 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
CIITA-213ENST00000618327 A0A087WV62 115 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 SLC16A6O15403 523 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 FCMRO60667 390 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ZNF227Q86WZ6 799 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 TMEM255BQ8WV15 326 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ITPKCQ96DU7 683 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 SIDT1Q9NXL6 827 aaKnown RBP12.85□□□□□ -0.35
CIITA-213ENST00000618327 ASB4Q9Y574 426 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 SOD1P00441 154 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 TCN2P20062 427 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 CRABP1P29762 137 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
CIITA-213ENST00000618327 SRYQ05066 204 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 NFATC3Q12968 1075 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 GGHQ92820 318 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 CCDC120Q96HB5 630 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 NRTNQ99748 197 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ARHGAP9Q9BRR9 750 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 BCL2L10Q9HD36 194 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms