RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RGS19P49795 217 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SRSF4Q08170 494 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 POU4F3Q15319 338 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 RNFT1Q5M7Z0 435 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 WDR74Q6RFH5 385 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 ADAMTSL4Q6UY14 1074 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF619Q8N2I2 560 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TMIGD2Q96BF3 282 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 OLFM3Q96PB7 478 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 AP1S3Q96PC3 154 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF300Q96RE9 604 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 KLF16Q9BXK1 252 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 TNFRSF19Q9NS68 423 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 FAM120CQ9NX05 1096 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 NUFIP1Q9UHK0 495 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 CNTN6Q9UQ52 1028 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TXNL1O43396 289 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ORM1P02763 201 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TBXA2RP21731 343 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LCN1P31025 176 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 CMC4P56277 68 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 GRB2P62993 217 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF91Q05481 1191 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PTCHD3Q3KNS1 767 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 STEAP1BQ6NZ63 245 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 THSD4Q6ZMP0 1018 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 FUBP1Q96AE4 644 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 RRNAD1Q96FB5 475 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 CRNNQ9UBG3 495 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 ODAMA1E959 279 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 FAM149AA5PLN7 773 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LTBRP36941 435 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ERVFRD-1P60508 538 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 NKX3-2P78367 333 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BAMBIQ13145 260 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LTB4RQ15722 352 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 STAC2Q6ZMT1 411 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF761Q86XN6 746 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF184Q99676 751 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 RIMS4Q9H426 269 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 UNKLQ9H9P5 680 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC25A19Q9HC21 320 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TCF7L2Q9NQB0 619 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC23A2Q9UGH3 650 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PLAGL1Q9UM63 463 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 TAS2R43P59537 309 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SEMA5AQ13591 1074 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DPYSL3Q14195 570 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMEM25Q86YD3 366 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SPOCK2Q92563 424 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF75CPQ92670 426 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC45A3Q96JT2 553 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PDLIM2Q96JY6 352 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 IL17BQ9UHF5 180 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OARD1Q9Y530 152 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MEIS3P1A6NDR6 274 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OTOL1A6NHN0 477 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 C11orf98E9PRG8 122 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SSX4O60224 188 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 UGDHO60701 494 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 THY1P04216 161 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 UBCP0CG48 685 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 BPIFB3P59826 476 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 IL5RAQ01344 420 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MFAP5Q13361 173 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TESK1Q15569 626 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR7A5Q15622 319 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TAB1Q15750 504 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CHI3L2Q15782 390 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 RBMXL3Q8N7X1 1067 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 SPATA4Q8NEY3 305 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR10AD1Q8NGE0 317 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PAFAH2Q99487 392 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SYT3Q9BQG1 590 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MOB1AQ9H8S9 216 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 BAIAP2Q9UQB8 552 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 BCKDHAP12694 445 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CRHBPP24387 322 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PTGIRP43119 386 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CLN3Q13286 438 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR4F17Q8NGA8 305 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR52K2Q8NGK3 314 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR51Q1Q8NH59 317 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC37A2Q8TED4 501 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 UTP4Q969X6 686 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 BTF3L4Q96K17 158 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR4F4Q96R69 305 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMEM59Q9BXS4 323 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HDHD2Q9H0R4 259 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OCIAD1Q9NX40 245 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SMPD3Q9NY59 655 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 CAPNS1P04632 268 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 UGT2B7P16662 529 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 AKR1C4P17516 323 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 COILP38432 576 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 RPS24P62847 133 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms