RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MPP7Q5T2T1 576 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 CCDC36Q8IYA8 594 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 CDS1Q92903 461 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 TEAD3Q99594 435 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 SLC6A15Q9H2J7 730 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 PRMT8Q9NR22 394 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 METTL21EPA6NDL7 271 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 RAD1O60671 282 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 THY1P04216 161 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 EPXP11678 715 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 TYRP14679 529 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 MAKP20794 623 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 S100A11P31949 105 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 STARP49675 285 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 TMEM69Q5SWH9 247 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 NIPAL3Q6P499 406 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 ZNF793Q6ZN11 406 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 TMUB2Q71RG4 321 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 PDZD9Q8IXQ8 264 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 TIFAQ96CG3 184 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 CNRIP1Q96F85 164 aaPredicted RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 ZNF346Q9UL40 294 aaKnown RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 GTF2A1LQ9UNN4 478 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 WNT6Q9Y6F9 365 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 FAM86C2PA6NEL3 165 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 MFSD2BA6NFX1 497 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 FAM25EA8MYX2 175 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 SUSD5O60279 629 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 GREM1O60565 184 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 SDC3O75056 442 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 RLN2P04090 185 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 HMGN1P05114 100 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 TMIGD3P0DMS9 266 aaPredicted RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 PCBP4P57723 403 aaKnown RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 RPS15P62841 145 aaKnown RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 LY6G5CQ5SRR4 150 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 SLC22A10Q63ZE4 541 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 FIGNL1Q6PIW4 674 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
MSH6-214ENST00000616033 OR4C6Q8NH72 309 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 PTP4A1Q93096 173 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 REG4Q9BYZ8 158 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 PITHD1Q9GZP4 211 aaPredicted RBP12.19□□□□□ -0.46
MSH6-214ENST00000616033 SLC38A1Q9H2H9 487 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 EVA1AQ9H8M9 152 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 NOX4Q9NPH5 578 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 SLC23A2Q9UGH3 650 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 INSL5Q9Y5Q6 135 aa12.19□□□□□ -0.46
MSH6-214ENST00000616033 A0A0G2JK05 382 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 MCRIP1C9JLW8 97 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 CCL16O15467 120 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ZGLP1P0C6A0 271 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SYN1P17600 705 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 MPIP34949 423 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 VEGFBP49765 207 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 MEOX2P50222 304 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 LHX8Q68G74 356 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 FRRS1Q6ZNA5 592 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 TMEFF1Q8IYR6 380 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 IL17RCQ8NAC3 791 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 KCT2Q8NC54 265 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 FGF11Q92914 225 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PAWRQ96IZ0 340 aaKnown RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 SARGQ9BW04 601 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SGPP1Q9BX95 441 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SLC6A20Q9NP91 592 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 FBXL3Q9UKT7 428 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ZMIZ1Q9ULJ6 1067 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ZNF860A6NHJ4 632 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 UNC119BA6NIH7 251 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PYCARD-AS1I3L0S3 204 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 KCNAB3O43448 404 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 NDUFA2O43678 99 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 C4BPBP20851 252 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSH6-214ENST00000616033 MAOBP27338 520 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PTH2RP49190 550 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 MC2RQ01718 297 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SLC9A5Q14940 896 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 GPNMBQ14956 572 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 TMEM215Q68D42 235 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 OR4C11Q6IEV9 310 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 GSG1LQ6UXU4 331 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 DIO2Q92813 273 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 HGDQ93099 445 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms