RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 FXYD6-FXYD2A0A087WZ82 144 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 A0A1W2PPL8 197 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RIIAD1A6NNX1 92 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 LMO7DNF2Z398 122 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PLPP1O14494 284 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 KLK10O43240 276 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RNF13O43567 381 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 FCARP24071 287 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 LCN1P31025 176 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RORAP35398 523 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RPS18P62269 152 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TRMT12Q53H54 448 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PAQR6Q6TCH4 344 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PRSS42Q7Z5A4 293 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 IZUMO1Q8IYV9 350 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 NKD1Q969G9 470 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 OR4K3Q96R72 315 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 S1PR5Q9H228 398 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 CHST8Q9H2A9 424 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RANBP3Q9H6Z4 567 aaPredicted RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 SERINC1Q9NRX5 453 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 C1GALT1Q9NS00 363 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 PRODH2Q9UF12 536 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 SLCO1B1Q9Y6L6 691 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 HSPE1-MOB4S4R3N1 261 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 RAB19A4D1S5 217 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 CCL4P13236 92 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 NTRK2Q16620 822 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 GXYLT1Q4G148 440 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 LRRC69Q6ZNQ3 347 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 FGD2Q7Z6J4 655 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 OR5M1Q8NGP8 315 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 SLC22A8Q8TCC7 542 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 OR52A5Q9H2C5 316 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 CHRDQ9H2X0 955 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 ACTL8Q9H568 366 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF768Q9H5H4 540 aaKnown RBP10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM138Q9NPI0 162 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 SLC6A13Q9NSD5 602 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM74BQ9NUR3 256 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 SIRT5Q9NXA8 310 aa10.07□□□□□ -0.8
FAM3A-221ENST00000612856 TRAV20A0A0B4J274 112 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 IGHV5-51A0A0C4DH38 117 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TLCD2A6NGC4 264 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SIGLEC5O15389 551 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ENTPD6O75354 484 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CLEC3AO75596 197 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ANXA8P13928 327 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SPINK2P20155 84 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 UQCRC2P22695 453 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CD1CP29017 333 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 STARP49675 285 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CSRP3P50461 194 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 P2RY14Q15391 338 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TEX261Q6UWH6 196 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 VASH2Q86V25 355 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SYNPOQ8N3V7 929 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SLC16A11Q8NCK7 471 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 OR52N2Q8NGI0 321 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 OR2A1Q8NGT9 310 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ELMOD3Q96FG2 381 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 LYSMD1Q96S90 227 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SRRQ9GZT4 340 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 RBFOX1Q9NWB1 397 aaKnown RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CNIH4Q9P003 139 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 KLHL21Q9UJP4 597 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 GPR52Q9Y2T5 361 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 U3KQ87 197 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 DOCK7Q96N67 2140 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TEX13CA0A0J9YWL9 993 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CD8B2A6NJW9 211 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 LRRTM2O43300 516 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TMPRSS11DO60235 418 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 STX11O75558 287 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ALDOBP05062 364 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 GLAP06280 429 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 RETP07949 1114 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 RD3LP0DJH9 198 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CD8BP10966 210 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 NAA10P41227 235 aaPredicted RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ATG9BQ674R7 924 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 KDM4DQ6B0I6 523 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ELP2Q6IA86 826 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM81Q6P7N7 255 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 OAFQ86UD1 273 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 KDM8Q8N371 416 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 LILRB1Q8NHL6 650 aaPredicted RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 DUSP19Q8WTR2 217 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 S100A13Q99584 98 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 NIPSNAP1Q9BPW8 284 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SEC22CQ9BRL7 303 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 NTMT1Q9BV86 223 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 NDRG4Q9ULP0 352 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms