RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 RCE1Q9Y256 329 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 A8MUA0 341 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 HCRTR1O43613 425 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 RCBTB2O95199 551 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 NGFRP08138 427 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF250P15622 560 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF3P17036 446 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 EMDP50402 254 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 AMZ1Q400G9 498 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ALG10BQ5I7T1 473 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SLC38A6Q8IZM9 456 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SEMA4CQ9C0C4 833 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ADGRL4Q9HBW9 690 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 KLK11Q9UBX7 282 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 DAPP1Q9UN19 280 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 A0A1B0GWA3 101 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 SLC22A31A6NKX4 558 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 GMDSO60547 372 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 RAD1O60671 282 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 HLA-DQB1P01920 261 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 TFP02787 698 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 HNRNPA1P09651 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 EEF1A1P68104 462 aaKnown RBP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF267Q14586 743 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 CHMP1BQ7LBR1 199 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF619Q8N2I2 560 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 ZPLD1Q8TCW7 415 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 POT1Q9NUX5 634 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 COLEC10Q9Y6Z7 277 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 A0A1B0GTH9 108 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 PRSS38A1L453 326 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 BLOC1S5-TXNDC5H3BN57 136 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 DNAAF1Q8NEP3 725 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 METTL17Q9H7H0 456 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-207ENST00000612273 CMC2Q9NRP2 79 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
COL6A1-207ENST00000612273 FLRT2O43155 660 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 RDH16O75452 317 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 CA3P07451 260 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 NID1P14543 1247 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 NPR2P20594 1047 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 DNASE1P24855 282 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 HTRA4P83105 476 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 TNK1Q13470 666 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 SLC36A2Q495M3 483 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 PRR23CQ6ZRP0 262 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 LNX2Q8N448 690 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 YIPF5Q969M3 257 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 RASD2Q96D21 266 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ZC3HAV1LQ96H79 300 aaKnown RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 TSPAN10Q9H1Z9 355 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 H0YGG7 62 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 H7C1C5 153 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ANXA3P12429 323 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 VEGFCP49767 419 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ARF3P61204 181 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 LCN6P62502 163 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ERVK-25P63136 954 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 RPS21P63220 83 aaKnown RBP12.96□□□□□ -0.33
COL6A1-207ENST00000612273 FAM53BQ14153 422 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF425Q6IV72 752 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 FIGLAQ6QHK4 219 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF680Q8NEM1 530 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 OR52R1Q8NGF1 315 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 FAM3CQ92520 227 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 SEC22CQ9BRL7 303 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.33
COL6A1-207ENST00000612273 A0A0G2JK05 382 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 MEIS3P1A6NDR6 274 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 POM121CA8CG34 1229 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 MCIDASD6RGH6 385 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 C1orf61Q13536 156 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 KIAA1324Q6UXG2 1013 aaKnown RBP12.96□□□□□ -0.34
COL6A1-207ENST00000612273 KANSL1Q7Z3B3 1105 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 ACOT12Q8WYK0 555 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 PELI1Q96FA3 418 aa12.96□□□□□ -0.34
COL6A1-207ENST00000612273 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms