RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 IL33O95760 270 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 UBL4AP11441 157 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 EFNA3P52797 238 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 CAV3P56539 151 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 GALEQ14376 348 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 NSDHLQ15738 373 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 GXYLT1Q4G148 440 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 ARHGAP40Q5TG30 622 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 VASNQ6EMK4 673 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 CBLN3Q6UW01 205 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 ZNF440Q8IYI8 595 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 OR52E2Q8NGJ4 325 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 OR4K13Q8NH42 304 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SMAP2Q8WU79 429 aaPredicted RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 ADOQ96SZ5 270 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 DPYSL5Q9BPU6 564 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 NEURL2Q9BR09 285 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 MED18Q9BUE0 208 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 HOXD1Q9GZZ0 328 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SP140LQ9H930 580 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SERTAD3Q9UJW9 196 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 MN1Q10571 1320 aaPredicted RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 CDC14CA4D256 554 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 CD8B2A6NJW9 211 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 MCIDASD6RGH6 385 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 GTPBP1O00178 669 aaKnown RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 DLGAP3O95886 979 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 IGKV3-11P04433 115 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SBK2P0C263 348 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 CD8BP10966 210 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 HIST1H1CP16403 213 aaKnown RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 SLC2A5P22732 501 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ZP2Q05996 745 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ELAVL1Q15717 326 aaKnown RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 TSSK4Q6SA08 328 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 MARCH9Q86YJ5 346 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 OR8H2Q8N162 312 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 NEIL3Q8TAT5 605 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ZNF721Q8TF20 911 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SLC41A2Q96JW4 573 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 CDX2Q99626 313 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 TIMP4Q99727 224 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ADGRL4Q9HBW9 690 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ICAM5Q9UMF0 924 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ADAM18Q9Y3Q7 739 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 IER3IP1Q9Y5U9 82 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 VPS13AQ96RL7 3174 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ARID1BQ8NFD5 2236 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 A0A1W2PQL4 384 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 AGRPO00253 132 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 OIP5O43482 229 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SNX4O95219 450 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 UTS2O95399 124 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 DDAH2O95865 285 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ARRB1P49407 418 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ZMAT1Q5H9K5 638 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 DESI1Q6ICB0 168 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 WBP2NLQ6ICG8 309 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 APOOLQ6UXV4 268 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 Q7L0L9 218 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SLITRK4Q8IW52 837 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 FAM71CQ8NEG0 241 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 SMPDL3BQ92485 455 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 ELF4Q99607 663 aaPredicted RBP12.48□□□□□ -0.41
NEK3-205ENST00000610828 COQ7Q99807 217 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 TRIM36Q9NQ86 728 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 FGF21Q9NSA1 209 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 CHRNA9Q9UGM1 479 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 V9GYH0 126 aa12.48□□□□□ -0.41
NEK3-205ENST00000610828 TCRBV16S1A1N1A0A5B0 115 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 PPM1BO75688 479 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 FOSL2P15408 326 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 BDH1Q02338 343 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 SKP2Q13309 424 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 CADM3Q8N126 398 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 GHDCQ8N2G8 530 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 WDFY2Q96P53 400 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 ERVMER34-1Q9H9K5 563 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 CPNE5Q9HCH3 593 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 INPP5EQ9NRR6 644 aa12.47□□□□□ -0.41
NEK3-205ENST00000610828 ASB6Q9NWX5 421 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms