RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ACOT12Q8WYK0 555 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TSACCQ96A04 125 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 COX14Q96I36 57 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 NMNAT3Q96T66 252 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 C20orf85Q9H1P6 137 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 NOX4Q9NPH5 578 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 DLL4Q9NR61 685 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 CA10Q9NS85 328 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 IER3IP1Q9Y5U9 82 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3DA0A087WVF3 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3IA0A087WXS9 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3EA0A087X179 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3KA0A087X1G2 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3FA6NER0 549 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3LB9A6J9 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3HP0C7X1 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 HIST1H1CP16403 213 aaKnown RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 CAMK2DQ13557 499 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 MELKQ14680 651 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 ANGPT1Q15389 498 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3GQ6DHY5 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3CQ6IPX1 549 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 POMZP3Q6PJE2 187 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 MRGPREQ86SM8 312 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D3Q8IZP1 549 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 C10orf53Q8N6V4 93 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 PMEPA1Q969W9 287 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 NXPE2Q96DL1 559 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 HHIPL1Q96JK4 782 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 HEXA-AS1Q9H8Q6 139 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 B3GNT2Q9NY97 397 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 MGAT4CQ9UBM8 478 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 MED31Q9Y3C7 131 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TFP02787 698 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 RUNX2Q13950 521 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 DEFB110Q30KQ9 67 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 FAM198BQ6UWH4 519 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 BOLLQ8N9W6 283 aaKnown RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 TMEM52Q8NDY8 209 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 OR4K14Q8NGD5 310 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 RBP7Q96R05 134 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 KCNN3Q9UGI6 736 aa18.85■□□□□ 0.61
SSBP3-216ENST00000610401 ELF5Q9UKW6 265 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-216ENST00000610401 EPXP11678 715 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 LCN1P31025 176 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 PRKAR1BP31321 381 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 ADH7P40394 386 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 PGDP52209 483 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 ERVK-21P61565 698 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 RPE65Q16518 533 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 DCST2Q5T1A1 773 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 YOD1Q5VVQ6 348 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-216ENST00000610401 NLRC3Q7RTR2 1065 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 UBE2Q1Q7Z7E8 422 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 MS4A15Q8N5U1 240 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 PGLYRP3Q96LB9 341 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 GTF2A1LQ9UNN4 478 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 SATB2Q9UPW6 733 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-216ENST00000610401 SYT5O00445 386 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 TRIM3O75382 744 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-216ENST00000610401 DCTDP32321 178 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 SHC2P98077 582 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 FAM78AQ5JUQ0 283 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 VN1R4Q7Z5H5 301 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 SIPA1Q96FS4 1042 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 NT5DC2Q9H857 520 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
SSBP3-216ENST00000610401 DOK2O60496 412 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 NGFRP08138 427 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 TMIGD3P0DMS9 266 aaPredicted RBP18.83■□□□□ 0.61
SSBP3-216ENST00000610401 ZNF3P17036 446 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 HK1P19367 917 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 NDUFS1P28331 727 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 STX4Q12846 297 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 LIX1LQ8IVB5 337 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 C1orf216Q8TAB5 229 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 PELI1Q96FA3 418 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 MYEF2Q9P2K5 600 aaKnown RBP18.83■□□□□ 0.61
SSBP3-216ENST00000610401 NUBP2Q9Y5Y2 271 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 TRANK1O15050 2925 aa18.83■□□□□ 0.61
SSBP3-216ENST00000610401 ARHGEF17Q96PE2 2063 aaPredicted RBP18.83■□□□□ 0.61
SSBP3-216ENST00000610401 H7C1C5 153 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TBX19O60806 448 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 RLN1P04808 185 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 CCL5P13501 91 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 PTGS2P35354 604 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 LCN6P62502 163 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 MLC1Q15049 377 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TCTE1Q5JU00 501 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 MRM1Q6IN84 353 aaKnown RBP18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM64Q6YI46 380 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 RTL4Q6ZR62 310 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF511Q8NB15 262 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TMIEQ8NEW7 156 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 GPR137Q96N19 417 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 MS4A4EQ96PG1 132 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 GINS4Q9BRT9 223 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 KCNK15Q9H427 330 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 CALML5Q9NZT1 146 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms