RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	C10orf105	Q8TEF2	133 aa		18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	HTRA1	Q92743	480 aa		18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	APH1A	Q96BI3	265 aa		18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	PRPF18	Q99633	342 aa	Known RBP	18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	MECR	Q9BV79	373 aa		18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	EML4	Q9HC35	981 aa	Known RBP	18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	TAS2R16	Q9NYV7	291 aa		18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	NOSIP	Q9Y314	301 aa	Known RBP	18.46	■□□□□ 0.55
NECAB3-222	ENST00000607805	H3F3A	P84243	136 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	RAB35	Q15286	201 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZNF544	Q6NX49	715 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	KLHL17	Q6TDP4	642 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	EIF3M	Q7L2H7	374 aa	Known RBP	18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	FBXL14	Q8N1E6	418 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	FNDC5	Q8NAU1	212 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	OIT3	Q8WWZ8	545 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	APOPT1	Q96IL0	206 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	SAP130	Q9H0E3	1048 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	CTPS2	Q9NRF8	586 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	ASB6	Q9NWX5	421 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	CHRNA9	Q9UGM1	479 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZDHHC2	Q9UIJ5	367 aa		18.45	■□□□□ 0.54
NECAB3-222	ENST00000607805	TENM1	Q9UKZ4	2725 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805		A0A1W2PR80	420 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CIB4	A0PJX0	185 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	GPR171	O14626	319 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CFLAR	O15519	480 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	KIAA0513	O60268	411 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	SCN2B	O60939	215 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CYP7B1	O75881	506 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	G6PD	P11413	515 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	THBS2	P35442	1172 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	FABP6	P51161	128 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CHRNE	Q04844	493 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	FUT5	Q11128	374 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR7E24	Q6IFN5	339 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	TYW3	Q6IPR3	259 aa	Known RBP	18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZCCHC23	Q6ZST2	131 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	ADGRG3	Q86Y34	549 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CLECL1	Q8IZS7	167 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CLEC4F	Q8N1N0	589 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	UBE2J2	Q8N2K1	259 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	PIGX	Q8TBF5	258 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	AGR3	Q8TD06	166 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	FAM168A	Q92567	244 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	PROX1	Q92786	737 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	INPP5K	Q9BT40	448 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC17A7	Q9P2U7	560 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	HDGFL3	Q9Y3E1	203 aa		18.44	■□□□□ 0.54
NECAB3-222	ENST00000607805	CCT8L1P	A6NM43	557 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	ANKRD28	O15084	1053 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	IGHV4-31	P0DP07	118 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	CLK1	P49759	484 aa	Known RBP	18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	CASP9	P55211	416 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	CLDN8	P56748	225 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC25A3	Q00325	362 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	KRTAP24-1	Q3LI83	254 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	CCDC103	Q8IW40	242 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC35G5	Q96KT7	338 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	KCNK17	Q96T54	332 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	MANSC1	Q9H8J5	431 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	ASIC5	Q9NY37	505 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	POU2F3	Q9UKI9	436 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	TRAPPC4	Q9Y296	219 aa		18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	SPIN1	Q9Y657	262 aa	Predicted RBP	18.43	■□□□□ 0.54
NECAB3-222	ENST00000607805	FKBP2	P26885	142 aa	Known RBP	18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	SOAT1	P35610	550 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	SERPINB5	P36952	375 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	EFNA4	P52798	201 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	CYB5R2	Q6BCY4	276 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR4F3	Q6IEY1	312 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	EMB	Q6PCB8	327 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	FRRS1	Q6ZNA5	592 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	GRINA	Q7Z429	371 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR52E4	Q8NGH9	312 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZG16B	Q96DA0	208 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	BEX2	Q9BXY8	128 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR11A1	Q9GZK7	315 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR51I1	Q9H343	314 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	LPAR3	Q9UBY5	353 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	DCTN4	Q9UJW0	460 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC35A3	Q9Y2D2	325 aa		18.42	■□□□□ 0.54
NECAB3-222	ENST00000607805	RNF103-CHMP3	A0A140T963	221 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	PRAMEF27	A3QJZ7	478 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	VWC2L	B2RUY7	222 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805		M0R1B8	84 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	RNASET2	O00584	256 aa	Known RBP	18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	MRPL33	O75394	65 aa	Known RBP	18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	SKAP2	O75563	359 aa	Predicted RBP	18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	TFPI	P10646	304 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	PHC1	P78364	1004 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	EMX2	Q04743	252 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	DEPDC4	Q8N2C3	294 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR8J2	Q8NGG1	315 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZHX1-C8orf76	Q96EF9	292 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	EXOSC3	Q9NQT5	275 aa	Known RBP	18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC17A5	Q9NRA2	495 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	POLE3	Q9NRF9	147 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	EXD2	Q9NVH0	621 aa		18.41	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms