RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 GTF2IRD2BQ6EKJ0 949 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 ABLIM2Q6H8Q1 611 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 TMPPEQ6ZT21 453 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 GTF2IRD2Q86UP8 949 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 COMTD1Q86VU5 262 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 PEX5LQ8IYB4 626 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 NINJ1Q92982 152 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 ACTR6Q9GZN1 396 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 ZNF385DQ9H6B1 395 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 BCO1Q9HAY6 547 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 OSGIN1Q9UJX0 560 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 TMED7Q9Y3B3 224 aa10.92□□□□□ -0.66
CTSA-210ENST00000606000 RAI1Q7Z5J4 1906 aaPredicted RBP10.92□□□□□ -0.66
CTSA-210ENST00000606000 MPDZO75970 2070 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 RAF1P04049 648 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 YES1P07947 543 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 PABPC4LP0CB38 370 aaKnown RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 IMPDH2P12268 514 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 DNASE1P24855 282 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 ACAA2P42765 397 aaKnown RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 ATP4BP51164 291 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 POLR2HP52434 150 aaKnown RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 HOXC5Q00444 222 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 BNIP2Q12982 314 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 ALKBH2Q6NS38 261 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 SPNS3Q6ZMD2 512 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 BEND4Q6ZU67 534 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 ATG4DQ86TL0 474 aaPredicted RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 STK32CQ86UX6 486 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 WFDC8Q8IUA0 241 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 CCDC103Q8IW40 242 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 GABRG1Q8N1C3 465 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 CADM2Q8N3J6 435 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 NFKBIDQ8NI38 313 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 SLC25A43Q8WUT9 341 aaPredicted RBP10.91□□□□□ -0.66
CTSA-210ENST00000606000 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 ZNF226Q9NYT6 803 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 KLHL9Q9P2J3 617 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 MYO9AB2RTY4 2548 aa10.91□□□□□ -0.66
CTSA-210ENST00000606000 A0A0G2JND7 137 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 ZNF716A6NP11 495 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 FAAHO00519 579 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 GOSR1O95249 250 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 PMS2P2O95744 297 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 PLAUP00749 431 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 ADAP00813 363 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 IGHV3-9P01782 118 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 BMP2P12643 396 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 NTF4P34130 210 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 MAGEA8P43361 318 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 OR2B6P58173 313 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 CSNK2A1P68400 391 aaPredicted RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 KEAP1Q14145 624 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 SELPLGQ14242 412 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 GNA13Q14344 377 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 GCNT6Q5T4J0 391 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 RNF220Q5VTB9 566 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 RETREG3Q86VR2 466 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 SLC43A2Q8N370 569 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 FOXC2Q99958 501 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 CXXC4Q9H2H0 198 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 UBTD1Q9HAC8 227 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 CALML5Q9NZT1 146 aa10.9□□□□□ -0.66
CTSA-210ENST00000606000 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 SPIN1Q9Y657 262 aaPredicted RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 ANKRD17O75179 2603 aaKnown RBP10.9□□□□□ -0.66
CTSA-210ENST00000606000 CREBBPQ92793 2442 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 A0A0G2JPF8 293 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 A0A1W2PP18 115 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 HNRNPCL2B2RXH8 293 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 HNRNPCL3B7ZW38 293 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 KLF4O43474 513 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 HNRNPCL1O60812 293 aaKnown RBP10.89□□□□□ -0.67
CTSA-210ENST00000606000 LYZL6O75951 148 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 PGM3O95394 542 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 THBS1P07996 1170 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 HNRNPCL4P0DMR1 293 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 ARAFP10398 606 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 CD53P19397 219 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
CTSA-210ENST00000606000 SLC1A3P43003 542 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 OR3A2P47893 321 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 FADDQ13158 208 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 LARS2Q15031 903 aaKnown RBP10.89□□□□□ -0.67
CTSA-210ENST00000606000 GLIPR1L2Q4G1C9 344 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 ZNF311Q5JNZ3 666 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 SFRP5Q5T4F7 317 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 CGB2Q6NT52 195 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 DLEU7Q6UYE1 221 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 MTDHQ86UE4 582 aaKnown RBP10.89□□□□□ -0.67
CTSA-210ENST00000606000 BBS10Q8TAM1 723 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 PMM1Q92871 262 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 SPATA9Q9BWV2 254 aa10.89□□□□□ -0.67
CTSA-210ENST00000606000 TMEM120AQ9BXJ8 343 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms