RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SLC9A8Q9Y2E8 581 aa13.37□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 hCG_2039718K7EN88 272 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ETV2O00321 342 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 RAD51CO43502 376 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 HMGN2P05204 90 aaKnown RBP13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MSMBP08118 114 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SBK3P0C264 359 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SLC16A1P53985 500 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 IL1RL1Q01638 556 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FOXL1Q12952 345 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LASP1Q14847 261 aaKnown RBP13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ADRM1Q16186 407 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 HIKESHIQ53FT3 197 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DCST2Q5T1A1 773 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TSPO2Q5TGU0 170 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZCCHC24Q8N2G6 241 aaKnown RBP13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ADAMTS15Q8TE58 950 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DNAJA3Q96EY1 480 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 OBP2BQ9NPH6 170 aa13.36□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ARFGEF3Q5TH69 2177 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 AKAP10O43572 662 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SEC22BO75396 215 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CRCPO75575 148 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PMS2P2O95744 297 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 IMPDH1P20839 514 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PAX7P23759 505 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KHKP50053 298 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SERPINB9P50453 376 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SESN3P58005 492 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 OR4F15Q8NGB8 312 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 OR51F2Q8NH61 342 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CDC42EP4Q9H3Q1 356 aaKnown RBP13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 MID1IP1Q9NPA3 183 aa13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ACSS1Q9NUB1 689 aaPredicted RBP13.35□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 DNPH1O43598 174 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 KRT33AO76009 404 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 BCL10O95999 233 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 PNPP00491 289 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 NPR2P20594 1047 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 APOBEC1P41238 236 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 OR2B6P58173 313 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 UBE2NP61088 152 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 NAAAQ02083 359 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF385BQ569K4 471 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ABHD12BQ7Z5M8 362 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 SLC22A9Q8IVM8 553 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ZNF764Q96H86 408 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 ANKRD27Q96NW4 1050 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 RAB17Q9H0T7 212 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 REEP4Q9H6H4 257 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 CHRNA9Q9UGM1 479 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 FAF1Q9UNN5 650 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 HDGFL3Q9Y3E1 203 aa13.34□□□□□ -0.27
NEDD8-MDP1-204ENST00000605847 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ESPNB1AK53 854 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ANKRD28O15084 1053 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TFP02787 698 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 KRT16P08779 473 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 FKBP2P26885 142 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GPR6P46095 362 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 FOXA1P55317 472 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TP53BP2Q13625 1128 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ANKRD16Q6P6B7 361 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 BPIFB2Q8N4F0 458 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF563Q8TA94 476 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ARL5BQ96KC2 179 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 DOK1Q99704 481 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 LAT2Q9GZY6 243 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 DDX28Q9NUL7 540 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 FLVCR1Q9Y5Y0 555 aa13.33□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 EIF1BO60739 113 aaKnown RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SKAP2O75563 359 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CSTAP01040 98 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GSTA1P08263 222 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ADRA2AP08913 450 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 UBTFL6P0CB48 400 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SAGP10523 405 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 EFNA1P20827 205 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ATP5F1P24539 256 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms