RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 NPHS2Q9NP85 383 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 A4GALTQ9NPC4 353 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 ELOVL5Q9NYP7 299 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 CHRNA9Q9UGM1 479 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 ZNF443Q9Y2A4 671 aaPredicted RBP9.47□□□□□ -0.89
TUBE1-210ENST00000604967 GMEB1Q9Y692 573 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 ACANP16112 2415 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 ROS1P08922 2347 aa9.47□□□□□ -0.89
TUBE1-210ENST00000604967 RAI1Q7Z5J4 1906 aaPredicted RBP9.46□□□□□ -0.89
TUBE1-210ENST00000604967 TMED7-TICAM2A0A0A6YYA0 188 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 FAAHO00519 579 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 FBP2O00757 339 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 TPST2O60704 377 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 PLGP00747 810 aaPredicted RBP9.46□□□□□ -0.9
TUBE1-210ENST00000604967 YES1P07947 543 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 ARAFP10398 606 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 CD53P19397 219 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 HTR2AP28223 471 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 PEX19P40855 299 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 APOBEC1P41238 236 aaKnown RBP9.46□□□□□ -0.9
TUBE1-210ENST00000604967 ATP4BP51164 291 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 P2RY4P51582 365 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 BNIP2Q12982 314 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 EEF1A1P5Q5VTE0 462 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 GRINAQ7Z429 371 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 PTOV1Q86YD1 416 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 DYDC1Q8WWB3 177 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 IGFBPL1Q8WX77 278 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 STON2Q8WXE9 905 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 LRRC46Q96FV0 321 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 CPPED1Q9BRF8 314 aaPredicted RBP9.46□□□□□ -0.9
TUBE1-210ENST00000604967 BCL2L10Q9HD36 194 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 PAQR5Q9NXK6 330 aaPredicted RBP9.46□□□□□ -0.9
TUBE1-210ENST00000604967 P2RX2Q9UBL9 471 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 TMED7Q9Y3B3 224 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 EMC9Q9Y3B6 208 aa9.46□□□□□ -0.9
TUBE1-210ENST00000604967 IGKV3D-15A0A087WSY6 115 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 A0A1W2PP18 115 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 CFAP73A6NFT4 308 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 SULT2B1O00204 365 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 NPIPB7O75200 414 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 PRKD3O94806 890 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 PGM3O95394 542 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 DBIP07108 87 aaKnown RBP9.45□□□□□ -0.9
TUBE1-210ENST00000604967 IL7RP16871 459 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 SLC7A1P30825 629 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 SLC1A3P43003 542 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 OR3A2P47893 321 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 CRYBA2P53672 197 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 CTBP2P56545 445 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 TXNL4AP83876 142 aaKnown RBP9.45□□□□□ -0.9
TUBE1-210ENST00000604967 HPCAP84074 193 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 RASGEF1BQ0VAM2 473 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 SQLEQ14534 574 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 RUNDC3AQ59EK9 446 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 RNF220Q5VTB9 566 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 TSPYL5Q86VY4 417 aaPredicted RBP9.45□□□□□ -0.9
TUBE1-210ENST00000604967 CMIPQ8IY22 773 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 LILRB1Q8NHL6 650 aaPredicted RBP9.45□□□□□ -0.9
TUBE1-210ENST00000604967 NFKBIDQ8NI38 313 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 ZNF563Q8TA94 476 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 TMEM234Q8WY98 164 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 S100PBPQ96BU1 408 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 PIK3IP1Q96FE7 263 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 SLC39A3Q9BRY0 314 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 MED18Q9BUE0 208 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 ACTR6Q9GZN1 396 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 RMND5AQ9H871 391 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 STOML1Q9UBI4 398 aa9.45□□□□□ -0.9
TUBE1-210ENST00000604967 MED13LQ71F56 2210 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 A0A0G2JPF8 293 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 GJE1A6NN92 205 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 TMEM229AB2RXF0 380 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 HNRNPCL2B2RXH8 293 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 HNRNPCL3B7ZW38 293 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 FXYD1O00168 92 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 ANP32DO95626 131 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 ADAP00813 363 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 IGHV3-9P01782 118 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 THBS1P07996 1170 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 PABPC4LP0CB38 370 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 HNRNPCL4P0DMR1 293 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 TFPIP10646 304 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 GPX2P18283 190 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 PSMB1P20618 241 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 ADSLP30566 484 aaPredicted RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 MAGEA8P43361 318 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 KCNJ5P48544 419 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 GZMMP51124 257 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 POLR2HP52434 150 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 CRISP3P54108 245 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 GUCY1A3Q02108 690 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 EGR4Q05215 589 aa9.44□□□□□ -0.9
TUBE1-210ENST00000604967 RNPS1Q15287 305 aaKnown RBP9.44□□□□□ -0.9
TUBE1-210ENST00000604967 PDSS1Q5T2R2 415 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms