RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 CORO2BQ9UQ03 480 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 TMED7Q9Y3B3 224 aa12.86□□□□□ -0.35
TUBE1-208ENST00000604743 A6NNC1 897 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 CASKO14936 926 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 FRS3O43559 492 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 CTAG2O75638 210 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 FESP07332 822 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 THBS1P07996 1170 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 PRG2P13727 222 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 MDH1P40925 334 aaKnown RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 ACAA2P42765 397 aaKnown RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 SLC1A3P43003 542 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 HTR3AP46098 478 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 POLR2HP52434 150 aaKnown RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 OR2B6P58173 313 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 MTPNP58546 118 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 COPZ1P61923 177 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 CSNK2A1P68400 391 aaPredicted RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 HOXC5Q00444 222 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 RASGEF1BQ0VAM2 473 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 SCARB2Q14108 478 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 SELPLGQ14242 412 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 POU4F3Q15319 338 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 RNF220Q5VTB9 566 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF550Q7Z398 422 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 ZC3HAV1LQ96H79 300 aaKnown RBP12.85□□□□□ -0.35
TUBE1-208ENST00000604743 CGREF1Q99674 301 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 BCL2L10Q9HD36 194 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 KLHL28Q9NXS3 571 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 ELOVL5Q9NYP7 299 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 CHST2Q9Y4C5 530 aa12.85□□□□□ -0.35
TUBE1-208ENST00000604743 HRNRQ86YZ3 2850 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 YES1P07947 543 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 GPX2P18283 190 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 SLC6A2P23975 617 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CXCR1P25024 350 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 AQP1P29972 269 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 UGT2B10P36537 528 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CAPRIN1Q14444 709 aaKnown RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 DAZAP2Q15038 168 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 PRAMEF8Q5VWM4 474 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 PRAMEF7Q5VXH5 474 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CDH24Q86UP0 819 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 STK32CQ86UX6 486 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 SLC43A2Q8N370 569 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 DPP10Q8N608 796 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 ANKRD27Q96NW4 1050 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 WFIKKN1Q96NZ8 548 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 ZNF300Q96RE9 604 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-208ENST00000604743 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 RASSF1Q9NS23 344 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
TUBE1-208ENST00000604743 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 FAAHO00519 579 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 FBP2O00757 339 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 CYTIPO60759 359 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ETS2P15036 469 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 CCKARP32238 428 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 BNIP2Q12982 314 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 KLF10Q13118 480 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ADRM1Q16186 407 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 CYP51A1Q16850 503 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 WBP2NLQ6ICG8 309 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 BEND4Q6ZU67 534 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.83□□□□□ -0.36
TUBE1-208ENST00000604743 KRT73Q86Y46 540 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ZHX1-C8orf76Q96EF9 292 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 PSD2Q9BQI7 771 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 SPATA5L1Q9BVQ7 753 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 PIF1Q9H611 641 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 SAR1AQ9NR31 198 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 TMEM181Q9P2C4 612 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 ANGPT4Q9Y264 503 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 CCDC168Q8NDH2 2452 aa12.83□□□□□ -0.36
TUBE1-208ENST00000604743 LOC100653049A0A140TA62 436 aa12.82□□□□□ -0.36
TUBE1-208ENST00000604743 ZC3H12DA2A288 527 aaKnown RBP12.82□□□□□ -0.36
TUBE1-208ENST00000604743 TPST1O60507 370 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms