RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 PRTFDC1Q9NRG1 225 aa10.85□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 WSB2Q9NYS7 404 aaPredicted RBP10.85□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 TFP02787 698 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 MT-ND5P03915 603 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 HK1P19367 917 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 MYL9P24844 172 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 HOXD12P35452 270 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ABHD4Q8TB40 342 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ZPLD1Q8TCW7 415 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 CHAC2Q8WUX2 184 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 HOXB13Q92826 284 aaPredicted RBP10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 DNAJA3Q96EY1 480 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 DEPDC7Q96QD5 511 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ORAI3Q9BRQ5 295 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 TTYH2Q9BSA4 534 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 WACQ9BTA9 647 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 LMF2Q9BU23 707 aaKnown RBP10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 NLKQ9UBE8 527 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 RASD1Q9Y272 281 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 A0A1W2PPC4 97 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 A6NL46 340 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 PSMD9O00233 223 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 GMFGO60234 142 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 CTNSO60931 367 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 CSTAP01040 98 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 RAB25P57735 213 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 KCNAB1Q14722 419 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 SLC25A35Q3KQZ1 300 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 NKAIN2Q5VXU1 208 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 RPL13AP3Q6NVV1 102 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 TMEM53Q6P2H8 277 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 VASH1Q7L8A9 365 aaPredicted RBP10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 RDH10Q8IZV5 341 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ZNF321PQ8N8H1 164 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 SCAIQ8N9R8 606 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 GHSRQ92847 366 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 DGAT2Q96PD7 388 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 TGM7Q96PF1 710 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 TRIM2Q9C040 744 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 KCNN2Q9H2S1 579 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 C14orf105Q9NVL8 296 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 EXTL2Q9UBQ6 330 aa10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 ZNF346Q9UL40 294 aaKnown RBP10.84□□□□□ -0.67
HMGN3-AS1-201ENST00000604516 A0A0B4J203 849 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 A8MUA0 341 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 C10orf142B7Z368 130 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SEC14L5O43304 696 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 LANCL1O43813 399 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 WNT1P04628 370 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GPR3P46089 330 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ULK3Q6PHR2 472 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 BCORP1Q8N888 145 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SAMD12Q8N8I0 201 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 AHCYL2Q96HN2 611 aaKnown RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 NMNAT3Q96T66 252 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 KLHDC3Q9BQ90 382 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SPRTNQ9H040 489 aaPredicted RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR10A5Q9H207 317 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RNF121Q9H920 327 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 Q9N2J8 555 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SOHLH2Q9NX45 425 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RPS6KB2Q9UBS0 482 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IGHV5-51A0A0C4DH38 117 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SDC3O75056 442 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 EIF4EP06730 217 aaKnown RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TCEA1P23193 301 aaKnown RBP10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SLC6A6P31641 620 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CD83Q01151 205 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 FGFBP1Q14512 234 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PRAMEF17Q5VTA0 474 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ASB18Q6ZVZ8 466 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GRAMD2AQ8IUY3 354 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 LSMEM1Q8N8F7 131 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 LMX1AQ8TE12 382 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ORAI1Q96D31 301 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PGLYRP3Q96LB9 341 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 FRMD6Q96NE9 622 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 YIPF2Q9BWQ6 316 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 POLE3Q9NRF9 147 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CHRNA9Q9UGM1 479 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 COL6A3P12111 3177 aa10.83□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 NPIPB9F8W1W9 429 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PLPP2O43688 288 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TFPIP10646 304 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GRPRP30550 384 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MAP2K3P46734 347 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CCR4P51679 360 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CCR5P51681 352 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ATP12AP54707 1039 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 BDH1Q02338 343 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GAS6Q14393 721 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms