RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ZNF208O43345 1280 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RGS10O43665 173 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SCO2O43819 266 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 IDH3BO43837 385 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR7A10O76100 309 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SAGP10523 405 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TACR3P29371 465 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FMO3P31513 532 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SLC6A6P31641 620 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OTX2P32243 289 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PTGDSP41222 190 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 APOBEC1P41238 236 aaKnown RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CCR4P51679 360 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CRYZQ08257 329 aaKnown RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TMED1Q13445 227 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MFSD13AQ14CX5 517 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 QPRTQ15274 297 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 COL28A1Q2UY09 1125 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FAM69BQ5VUD6 431 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 Q6ZPB1 254 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OAFQ86UD1 273 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SPARTQ8N0X7 666 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FADS6Q8N9I5 356 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF540Q8NDQ6 660 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 BPIFB6Q8NFQ5 453 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR8D4Q8NGM9 314 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RFKQ969G6 155 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NKD1Q969G9 470 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 KIAA1143Q96AT1 154 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RNF31Q96EP0 1072 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ANGPTL4Q9BY76 406 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PLA2G12AQ9BZM1 189 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 EGLN3Q9H6Z9 239 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FKRPQ9H9S5 495 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 KLRF1Q9NZS2 232 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PPP4R1LQ9P1A2 415 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF229Q9UJW7 825 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SLC6A5Q9Y345 797 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 AHCTF1Q8WYP5 2266 aa11.19□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 A8MVM7 634 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 KDM4EB2RXH2 506 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ARPC3O15145 178 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SURF4O15260 269 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PRODHO43272 600 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR2T1O43869 369 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NPIPB7O75200 414 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NDUFB2O95178 105 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SNX4O95219 450 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NTN1O95631 604 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 HTR1AP08908 422 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 LIPCP11150 499 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CXCR1P25024 350 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ITPKBP27987 946 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ADH6P28332 368 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SOX3P41225 446 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 EIF1P41567 113 aaKnown RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CASP3P42574 277 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CLDN6P56747 220 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FXYD6P3P58550 94 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 AIMP2Q13155 320 aaKnown RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ZNF74Q16587 644 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 NADK2Q4G0N4 442 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TMEM236Q5W0B7 351 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ACSM5Q6NUN0 579 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ARHGAP11AQ6P4F7 1023 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 SLC46A3Q7Z3Q1 461 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 GID4Q8IVV7 300 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ALDH16A1Q8IZ83 802 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OR10G3Q8NGC4 313 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RNF217Q8TC41 542 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 THAP3Q8WTV1 239 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TMEM41AQ96HV5 264 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PLEKHA8Q96JA3 519 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 FER1L6-AS2Q96M78 137 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 RACGAP1Q9H0H5 632 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 UBQLN3Q9H347 655 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 DSN1Q9H410 356 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PTGES2Q9H7Z7 377 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 LIN28AQ9H9Z2 209 aaKnown RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 ASCL3Q9NQ33 180 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 CMC2Q9NRP2 79 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 PAK1IP1Q9NWT1 392 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TEKT2Q9UIF3 430 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 OSGIN1Q9UJX0 560 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 TRAV36DV7A0A075B6V5 113 aa11.17□□□□□ -0.62
NEDD8-MDP1-203ENST00000604306 LOC101059948A0A1B0GTJ6 334 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms