RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SDC1P18827 310 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TPSB2P20231 275 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SERPINA2P20848 420 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SSTR4P31391 388 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ARL4AP40617 200 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CAMLGP49069 296 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 KHKP50053 298 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 VAMP7P51809 220 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SPOCK1Q08629 439 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM115Q12893 351 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TPSAB1Q15661 275 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SPDYE7PQ495Y7 208 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CBWD3Q5JTY5 395 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CBWD5Q5RIA9 395 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 COL5A1-AS1Q5SY13 56 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IDNKQ5T6J7 187 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PIP5KL1Q5T9C9 394 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM91Q6ZNR0 172 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CBWD2Q8IUF1 395 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CPXM2Q8N436 756 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF614Q8N883 585 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR2AP1Q8NGE2 309 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR10R2Q8NGX6 335 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CCDC107Q8WV48 283 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 MYLIPQ8WY64 445 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 KCTD12Q96CX2 325 aaKnown RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 FOXN4Q96NZ1 517 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 GPR20Q99678 358 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CBWD1Q9BRT8 395 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 RIOK2Q9BVS4 552 aaKnown RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ACE2Q9BYF1 805 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 HIPK2Q9H2X6 1198 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PRDM12Q9H4Q4 367 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SLC52A3Q9NQ40 469 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZCCHC3Q9NUD5 404 aaKnown RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SPG21Q9NZD8 308 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 NTMQ9P121 344 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 MYOTQ9UBF9 498 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IL20RAQ9UHF4 553 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CBLCQ9ULV8 474 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PCDHB1Q9Y5F3 818 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF716A6NP11 495 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TLR4O00206 839 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF593O00488 134 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF735P0CB33 412 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SLC35E2BP0CK96 405 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SLC35E2P0CK97 266 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 NCK1P16333 377 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TAF6P49848 677 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF140P52738 457 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CRISP1P54107 249 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 F2RL1P55085 397 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CTBP2P56545 445 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CLDN18P56856 261 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PPP2CBP62714 309 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RAB1AP62820 205 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PPP2CAP67775 309 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MXD1Q05195 221 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RUNX2Q13950 521 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM241Q24JQ0 296 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TCTN3Q6NUS6 607 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SLC39A4Q6P5W5 647 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 USP17L2Q6R6M4 530 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 HIST2H3AQ71DI3 136 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 LARP4Q71RC2 724 aaKnown RBP eCLIP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SERPINA11Q86U17 422 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 LRRTM1Q86UE6 522 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 GLB1L2Q8IW92 636 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF679Q8IYX0 411 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 BHLHE23Q8NDY6 225 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 OR1J4Q8NGS1 313 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF596Q8TC21 504 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CLEC4DQ8WXI8 215 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 PIGBQ92521 554 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CTHRC1Q96CG8 243 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 THUMPD3Q9BV44 507 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 C1QTNF2Q9BXJ5 285 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SYT4Q9H2B2 425 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM38AQ9H6F2 299 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CACNG4Q9UBN1 327 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF346Q9UL40 294 aaKnown RBP8.23□□□□□ -1.09
COMMD3-215ENST00000602574 MMP24Q9Y5R2 645 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 KPTNQ9Y664 436 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 POMT1Q9Y6A1 747 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 LOC285095A0A1B0GVY8 99 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 A6NLC8 198 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 SNRPGP15A8MWD9 76 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 G3V3G9 751 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 OR7A17O14581 309 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CDIPTO14735 213 aa8.23□□□□□ -1.09
COMMD3-215ENST00000602574 CYB5BO43169 146 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms