RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
RPS28-204ENST00000602140 GRIP2Q9C0E4 1043 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 OR11A1Q9GZK7 315 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 BARX1Q9HBU1 254 aaPredicted RBP11.6□□□□□ -0.55
RPS28-204ENST00000602140 POLE3Q9NRF9 147 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 B3GALT5Q9Y2C3 310 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 GOLGA8QA0A0J9YX86 632 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 A0A1W2PR80 420 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 GOLGA8OA6NCC3 632 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CLDN24A6NM45 220 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 GOLGA8NF8WBI6 632 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 SSX4O60224 188 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 SERPINE1P05121 402 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 MYZAPP0CAP1 466 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CCNA2P20248 432 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 NTF4P34130 210 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CHI3L1P36222 383 aaPredicted RBP11.59□□□□□ -0.55
RPS28-204ENST00000602140 KHKP50053 298 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 ZNF83P51522 516 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 OR2B6P58173 313 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 ABCE1P61221 599 aaKnown RBP11.59□□□□□ -0.55
RPS28-204ENST00000602140 KCNJ10P78508 379 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CHRNEQ04844 493 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CASP8Q14790 479 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 EMBQ6PCB8 327 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 TMEM108Q6UXF1 575 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 GRINAQ7Z429 371 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 ADGRG3Q86Y34 549 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CCDC103Q8IW40 242 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 PIGXQ8TBF5 258 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 AENQ8WTP8 325 aaKnown RBP11.59□□□□□ -0.55
RPS28-204ENST00000602140 TESCQ96BS2 214 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 NEURL3Q96EH8 262 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 RADILQ96JH8 1075 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 C20orf27Q9GZN8 174 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.59□□□□□ -0.55
RPS28-204ENST00000602140 ASB6Q9NWX5 421 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 MARCOQ9UEW3 520 aaPredicted RBP11.59□□□□□ -0.55
RPS28-204ENST00000602140 POU2F3Q9UKI9 436 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 MGAT4BQ9UQ53 548 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 HDGFL3Q9Y3E1 203 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 SLC25A15Q9Y619 301 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 CADP27708 2225 aa11.59□□□□□ -0.55
RPS28-204ENST00000602140 PRAMEF27A3QJZ7 478 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 E7EQL1 145 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 GPR171O14626 319 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 DNPH1O43598 174 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 TLX2O43763 284 aaPredicted RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 CD5LO43866 347 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 MRPL33O75394 65 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 C1QCP02747 245 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 IDH2P48735 452 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 CLK1P49759 484 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 RPL14P50914 215 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 SLC16A1P53985 500 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 FOXG1P55316 489 aaPredicted RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 HPCAP84074 193 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 PLAURQ03405 335 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 SPOCK1Q08629 439 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 NRF1Q16656 503 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 SPANXN4Q5MJ08 99 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 SLC22A25Q6T423 547 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 KLHL17Q6TDP4 642 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 LSRQ86X29 649 aaPredicted RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 CNOT9Q92600 299 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 SLC35A5Q9BS91 424 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 RHNO1Q9BSD3 238 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 TMEM109Q9BVC6 243 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 CACNG6Q9BXT2 260 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 EXOSC3Q9NQT5 275 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 TAS2R16Q9NYV7 291 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 COL6A5A8TX70 2615 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 ATRQ13535 2644 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 CR1P17927 2039 aa11.58□□□□□ -0.56
RPS28-204ENST00000602140 CHD3Q12873 2000 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 SONP18583 2426 aaKnown RBP11.58□□□□□ -0.56
RPS28-204ENST00000602140 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 TMED7-TICAM2A0A0A6YYA0 188 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 E9PBE3 544 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 M0R1B8 84 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 HMGN4O00479 90 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 AP3D1O14617 1153 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 BIRC5O15392 142 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 DHRS4L1P0CG22 281 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 LBPP18428 481 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 PTAFRP25105 342 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 CD40P25942 277 aa11.57□□□□□ -0.56
RPS28-204ENST00000602140 S100A3P33764 101 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms