RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 HCN1O60741 890 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
IRF3-229ENST00000601373 NTN1O95631 604 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 HMGN1P05114 100 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 SMIM18P0DKX4 95 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 LIPCP11150 499 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 MAKP20794 623 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 EEF1B2P24534 225 aaKnown RBP12.48□□□□□ -0.41
IRF3-229ENST00000601373 CXCR1P25024 350 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TACR3P29371 465 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 PTGDSP41222 190 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 CASP3P42574 277 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 SLC9A3P48764 834 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 DLX5P56178 289 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 SNRPGP62308 76 aaKnown RBP12.48□□□□□ -0.41
IRF3-229ENST00000601373 CRYZQ08257 329 aaKnown RBP12.48□□□□□ -0.41
IRF3-229ENST00000601373 Q0VFX4 171 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 QPRTQ15274 297 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TMEM236Q5W0B7 351 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 LAIR2Q6ISS4 152 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 ISLR2Q6UXK2 745 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 IL20RBQ6UXL0 311 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 GRINAQ7Z429 371 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 BPIFB6Q8NFQ5 453 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 OR8J1Q8NGP2 316 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 SLC38A2Q96QD8 506 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 DPH1Q9BZG8 443 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 ATP13A2Q9NQ11 1180 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 RASSF1Q9NS23 344 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 C20orf141Q9NUB4 165 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TBC1D23Q9NUY8 699 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 CLN6Q9NWW5 311 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 ZNF226Q9NYT6 803 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TAS2R10Q9NYW0 307 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 WIF1Q9Y5W5 379 aa12.48□□□□□ -0.41
IRF3-229ENST00000601373 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
IRF3-229ENST00000601373 PTPRBP23467 1997 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 TRIM64CA6NLI5 447 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 ENO4A6NNW6 628 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 FAM47E-STBD1D6RA91 191 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 KPNA4O00629 521 aaPredicted RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 PTP4A3O75365 173 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 WBP4O75554 376 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 SAGP10523 405 aaPredicted RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 GABRB1P18505 474 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 RPL5P46777 297 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 POLR2HP52434 150 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 NR1H2P55055 460 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 AIMP2Q13155 320 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 ATP1A4Q13733 1029 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 RTP5Q14D33 572 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 ANKDD1AQ495B1 522 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 ZBED5Q49AG3 693 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 C5orf46Q6UWT4 87 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 RTL4Q6ZR62 310 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 MEX3DQ86XN8 651 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 PAQR8Q8TEZ7 354 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 IPCEF1Q8WWN9 437 aaPredicted RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 DSN1Q9H410 356 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 EGLN3Q9H6Z9 239 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 IL17BQ9UHF5 180 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 OSGIN1Q9UJX0 560 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 BAIAP2Q9UQB8 552 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 SIGLEC7Q9Y286 467 aa12.47□□□□□ -0.41
IRF3-229ENST00000601373 MRPS18BQ9Y676 258 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 CHCHD2Q9Y6H1 151 aaPredicted RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 HELZ2Q9BYK8 2649 aaKnown RBP12.47□□□□□ -0.41
IRF3-229ENST00000601373 APC2O95996 2303 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 LOC400499M0QZD8 3231 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 CDC42EP2O14613 210 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 FAM20BO75063 409 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 SLC25A12O75746 678 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 SMNDC1O75940 238 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■■□□ 15.3
IRF3-229ENST00000601373 ATP6V1B1P15313 513 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 FUT1P19526 365 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 MST1P26927 711 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 FMO3P31513 532 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 PCYT1AP49585 367 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 MAP2K6P52564 334 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 OCLNQ16625 522 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 ACER2Q5QJU3 275 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 MEDAGQ5VYS4 303 aa12.46□□□□□ -0.41
IRF3-229ENST00000601373 FCRLBQ6BAA4 426 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms