RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ARL5BQ96KC2 179 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 BPESC1Q9GZL8 116 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 NMUR2Q9GZQ4 415 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 C12orf65Q9H3J6 166 aaKnown RBP14.65□□□□□ -0.06
USE1-208ENST00000600970 MYOZ1Q9NP98 299 aaPredicted RBP14.65□□□□□ -0.06
USE1-208ENST00000600970 CENPVL1A0A0U1RR11 272 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 A0A1W2PPM1 405 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 UBTFL6P0CB48 400 aaPredicted RBP14.64□□□□□ -0.07
USE1-208ENST00000600970 CFPP27918 469 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 HPCAL1P37235 193 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 GPR68Q15743 365 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 ZNF141Q15928 474 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 SPDYE7PQ495Y7 208 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 CASP12Q6UXS9 341 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 C12orf54Q6X4T0 127 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 ANKS4BQ8N8V4 417 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 VRK1Q99986 396 aaPredicted RBP14.64□□□□□ -0.07
USE1-208ENST00000600970 CCDC106Q9BWC9 280 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 CTPS2Q9NRF8 586 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 SLC7A10Q9NS82 523 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 OXSMQ9NWU1 459 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 UPB1Q9UBR1 384 aa14.64□□□□□ -0.07
USE1-208ENST00000600970 SPRY1O43609 319 aaPredicted RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 FCMRO60667 390 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 UGT2B17O75795 530 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 C6orf47O95873 294 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 CSTAP01040 98 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 APOBEC1P41238 236 aaKnown RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 MAGEA8P43361 318 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 SNRPD2P62316 118 aaKnown RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 OLIG3Q7RTU3 272 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 C17orf53Q8N3J3 647 aaPredicted RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 ZNF540Q8NDQ6 660 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 OR5AK3PQ8NH89 298 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 SFXN5Q8TD22 340 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 PSMC3IPQ9P2W1 217 aaPredicted RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 CHRNA9Q9UGM1 479 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 TBK1Q9UHD2 729 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 HDGFL3Q9Y3E1 203 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 DNAJC15Q9Y5T4 150 aa14.63□□□□□ -0.07
USE1-208ENST00000600970 SPIN1Q9Y657 262 aaPredicted RBP14.63□□□□□ -0.07
USE1-208ENST00000600970 NUP214P35658 2090 aaPredicted RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 LRP5LA4QPB2 252 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 RIPK2O43353 540 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 DNPH1O43598 174 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 PLIN3O60664 434 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 OR2B6P58173 313 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 PRPS1P60891 318 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 LSM12Q3MHD2 195 aaKnown RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 CCDC153Q494R4 210 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 C1QTNF12Q5T7M4 302 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 TSPO2Q5TGU0 170 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 KANK2Q63ZY3 851 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 SLC46A3Q7Z3Q1 461 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 NOA1Q8NC60 698 aaKnown RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 MOAP1Q96BY2 351 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 OR11A1Q9GZK7 315 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 ADAM19Q9H013 955 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 TMEFF2Q9UIK5 374 aaPredicted RBP14.62□□□□□ -0.07
USE1-208ENST00000600970 MKLN1Q9UL63 735 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 FLVCR1Q9Y5Y0 555 aa14.62□□□□□ -0.07
USE1-208ENST00000600970 DYSFO75923 2080 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 TMEM114B3SHH9 223 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 ANKRD28O15084 1053 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 BCAS1O75363 584 aaPredicted RBP14.61□□□□□ -0.07
USE1-208ENST00000600970 STX11O75558 287 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 SLU7O95391 586 aaKnown RBP14.61□□□□□ -0.07
USE1-208ENST00000600970 WNT11O96014 354 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 CHEK2O96017 543 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 CPA3P15088 417 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 MATN1P21941 496 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 IL2RGP31785 369 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 PGM1P36871 562 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 SERPINF1P36955 418 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 SRP14P37108 136 aaKnown RBP14.61□□□□□ -0.07
USE1-208ENST00000600970 RPS26P62854 115 aaKnown RBP14.61□□□□□ -0.07
USE1-208ENST00000600970 H3F3AP84243 136 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 TGFBR3Q03167 851 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 ARHGAP11BQ3KRB8 267 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 EIF3MQ7L2H7 374 aaKnown RBP14.61□□□□□ -0.07
USE1-208ENST00000600970 ADGRG3Q86Y34 549 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 FAM71CQ8NEG0 241 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 ZNF563Q8TA94 476 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 COQ8BQ96D53 544 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 SERHL2Q9H4I8 314 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 CA10Q9NS85 328 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 PARPBPQ9NWS1 579 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 GIMAP2Q9UG22 337 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 SLC9A8Q9Y2E8 581 aa14.61□□□□□ -0.07
USE1-208ENST00000600970 IGHV1-18A0A0C4DH31 117 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 B9A039 149 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 STAMBPO95630 424 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 AK1P00568 194 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 MPGP29372 298 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 CLK1P49759 484 aaKnown RBP14.6□□□□□ -0.07
USE1-208ENST00000600970 PTGR1Q14914 329 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 MAPK14Q16539 360 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms