RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CNOT9Q92600 299 aaKnown RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 CPNE4Q96A23 557 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 MBD6Q96DN6 1003 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 REXO5Q96IC2 774 aaKnown RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 OR5B2Q96R09 309 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 SAP130Q9H0E3 1048 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 TIGARQ9NQ88 270 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 GLRX2Q9NS18 164 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 EDARQ9UNE0 448 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 RTTNQ86VV8 2226 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-203ENST00000598359 AP3D1O14617 1153 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 GYG2O15488 501 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 DNAJA2O60884 412 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 PGCP20142 388 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 CCNA2P20248 432 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 EDNRAP25101 427 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ADAM8P78325 824 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 HPCAP84074 193 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 KLF10Q13118 480 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 TMEM201Q5SNT2 666 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 C3orf33Q6P1S2 294 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 CXorf67Q86X51 503 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-203ENST00000598359 HEATR5AQ86XA9 2040 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 WFDC8Q8IUA0 241 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 RBM15BQ8NDT2 890 aaKnown RBP12.24□□□□□ -0.45
SCAF1-203ENST00000598359 FAM71CQ8NEG0 241 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 WFDC11Q8NEX6 87 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 OR9I1Q8NGQ6 314 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ST8SIA1Q92185 356 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 CMTM5Q96DZ9 223 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ACTR6Q9GZN1 396 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 SLC38A1Q9H2H9 487 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 CTPS2Q9NRF8 586 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 KLHL13Q9P2N7 655 aa12.24□□□□□ -0.45
SCAF1-203ENST00000598359 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-203ENST00000598359 B2RBV5 119 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 RFXANKO14593 260 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 SMAD9O15198 467 aaKnown RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 KLF4O43474 513 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 SLC22A3O75751 556 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 PRKD3O94806 890 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 TFPIP10646 304 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 IDO1P14902 403 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 RAC3P60763 192 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 IRX1P78414 480 aaPredicted RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 KCNJ10P78508 379 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 PDCD4Q53EL6 469 aaKnown RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 GTF2IRD2BQ6EKJ0 949 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 TFAP2EQ6VUC0 442 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 BEND4Q6ZU67 534 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 GTF2IRD2Q86UP8 949 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 STK32CQ86UX6 486 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 TRIML2Q8N7C3 387 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF563Q8TA94 476 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 VPS33AQ96AX1 596 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 AURKBQ96GD4 344 aaPredicted RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF300Q96RE9 604 aaPredicted RBP12.23□□□□□ -0.45
SCAF1-203ENST00000598359 OR11A1Q9GZK7 315 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 POLE3Q9NRF9 147 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 SLC35A3Q9Y2D2 325 aa12.23□□□□□ -0.45
SCAF1-203ENST00000598359 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 UBDO15205 165 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 PLAUP00749 431 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 FESP07332 822 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 YES1P07947 543 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 GUSBP08236 651 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 NR2F1P10589 423 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 COX4I1P13073 169 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 ETFAP13804 333 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 IDH2P48735 452 aaKnown RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 DIO1P49895 249 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 ATP4BP51164 291 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 MAPK11Q15759 364 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 KRTAP1-3Q8IUG1 177 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 TRNT1Q96Q11 434 aaKnown RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 SERINC1Q9NRX5 453 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-203ENST00000598359 PRSS50Q9UI38 385 aa12.22□□□□□ -0.45
SCAF1-203ENST00000598359 AGAP5A6NIR3 686 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF814B7Z6K7 855 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 SULT2B1O00204 365 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ADAP00813 363 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 IL6P05231 212 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 POLR2JP52435 117 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms