RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CCDC106Q9BWC9 280 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 CACNG6Q9BXT2 260 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 C20orf27Q9GZN8 174 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 AKTIPQ9H8T0 292 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 YAE1D1Q9NRH1 226 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 ACER3Q9NUN7 267 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 NOP53Q9NZM5 478 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 WDR45Q9Y484 360 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 ATRQ13535 2644 aa10.66□□□□□ -0.7
SOX2-OT-228ENST00000597828 IGKV3D-15A0A087WSY6 115 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 A0A096LNT2 108 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 RNASET2O00584 256 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 CD5LO43866 347 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SCN2BO60939 215 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 AK1P00568 194 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 H2AFXP16104 143 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SERPINB5P36952 375 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 CSNK2A1P68400 391 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 CHRNEQ04844 493 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 C9orf135Q5VTT2 229 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SAXO2Q658L1 398 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 BHLHB9Q6PI77 547 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 DNAJC14Q6Y2X3 702 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 CCDC103Q8IW40 242 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 OR52E4Q8NGH9 312 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 MIPOL1Q8TD10 442 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 XAGE5Q8WWM1 108 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 TMEM234Q8WY98 164 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 ROPN1LQ96C74 230 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 MUCL1Q96DR8 90 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 C1QTNF6Q9BXI9 259 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 DPY30Q9C005 99 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 KCNK9Q9NPC2 374 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SERINC1Q9NRX5 453 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 ASIC5Q9NY37 505 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 SLC25A15Q9Y619 301 aa10.65□□□□□ -0.7
SOX2-OT-228ENST00000597828 FBN3Q75N90 2809 aa10.65□□□□□ -0.71
SOX2-OT-228ENST00000597828 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.71
SOX2-OT-228ENST00000597828 GOLGA8QA0A0J9YX86 632 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 GOLGA8OA6NCC3 632 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 DUXAA6NLW8 204 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 GOLGA8NF8WBI6 632 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 M0R1B8 84 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 ANKRD28O15084 1053 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 TP53P04637 393 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 ITGA5P08648 1049 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 NUDT6P53370 316 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 MAD2L1Q13257 205 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 CHI3L2Q15782 390 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 GPAT3Q53EU6 434 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 SPANXN4Q5MJ08 99 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 FBXW9Q5XUX1 488 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 HMBOX1Q6NT76 420 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 SLC22A25Q6T423 547 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 EIF3MQ7L2H7 374 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 MTDHQ86UE4 582 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 ADGRG3Q86Y34 549 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 NUDCD3Q8IVD9 361 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 OR8J2Q8NGG1 315 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 SLC25A43Q8WUT9 341 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 CNOT9Q92600 299 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 APH1AQ96BI3 265 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 SORT1Q99523 831 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 VIPAS39Q9H9C1 493 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 SSU72Q9NP77 194 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 EXD2Q9NVH0 621 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 EMC3Q9P0I2 261 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 POU2F3Q9UKI9 436 aa10.64□□□□□ -0.71
SOX2-OT-228ENST00000597828 TMEM72A0PK05 275 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 ZC3H12DA2A288 527 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 CCT8L1PA6NM43 557 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 PMS2P2O95744 297 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 IMPDH2P12268 514 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 UQCRC2P22695 453 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 CD40P25942 277 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 TTKP33981 857 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 APOBEC1P41238 236 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 IDH2P48735 452 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 KHKP50053 298 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 NME5P56597 212 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 OR2B6P58173 313 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 GABRA6Q16445 453 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 SYPL1Q16563 259 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 ATAD3BQ5T9A4 648 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 AGAP6Q5VW22 663 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 CASP12Q6UXS9 341 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 HOMEZQ8IX15 550 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 PHC2Q8IXK0 858 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 ZNF525Q8N782 197 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 ANKFN1Q8N957 763 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 SPATA3Q8NHX4 192 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 ARL8AQ96BM9 186 aa10.63□□□□□ -0.71
SOX2-OT-228ENST00000597828 TEX37Q96LM6 180 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms