RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 DSN1Q9H410 356 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 RNPEPL1Q9HAU8 725 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 CTPS2Q9NRF8 586 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 MED11Q9P086 117 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 C6orf203Q9P0P8 240 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 DKKL1Q9UK85 242 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 PRDM4Q9UKN5 801 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 ICAM5Q9UMF0 924 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 TESMINQ9Y4I5 508 aa10.93□□□□□ -0.66
SHKBP1-213ENST00000597325 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 TRAPPC13A5PLN9 417 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 J3KTA2 159 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ADAM10O14672 748 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PEX1O43933 1283 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 TRIM3O75382 744 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 GADD45GO95257 159 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 H1F0P07305 194 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ANPEPP15144 967 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 FOSL1P15407 271 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 RRM2P31350 389 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ACAA2P42765 397 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 IDH2P48735 452 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 CDH12P55289 794 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PLGLB1Q02325 96 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ST3GAL3Q11203 375 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 QPRTQ15274 297 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 OR1Q1Q15612 314 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 TIGD3Q6B0B8 471 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 FADS6Q8N9I5 356 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PIK3C3Q8NEB9 887 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ADAMTS16Q8TE57 1224 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PHF10Q8WUB8 498 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 SDCCAG3Q96C92 435 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ARSGQ96EG1 525 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 SCMH1Q96GD3 660 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC41A3Q96GZ6 507 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 CENPNQ96H22 339 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PKP2Q99959 881 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 HES7Q9BYE0 225 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PROK2Q9HC23 129 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 ZFP64Q9NPA5 681 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 DEPPQ9NTK1 212 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 TUBA8Q9NY65 449 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 TAS2R10Q9NYW0 307 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 STX18Q9P2W9 335 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 SAMHD1Q9Y3Z3 626 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 PCDHGB6Q9Y5F9 930 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 CSAG2Q9Y5P2 127 aa10.92□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A087WZY1 265 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A1B0GWA3 101 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ACOT7O00154 380 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TNFRSF11BO00300 401 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TPST2O60704 377 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ADAM11O75078 769 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 CBR3O75828 277 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 THRBP10828 461 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 GDF1P27539 372 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 MEOX1P50221 254 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ARHGDIAP52565 204 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SESN3P58005 492 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 FOXD4Q12950 439 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 PIN1Q13526 163 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 GK3PQ14409 553 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF169Q14929 603 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TRAM2Q15035 370 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TOMM20Q15388 145 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ALG10BQ5I7T1 473 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ULK3Q6PHR2 472 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 RPTNQ6XPR3 784 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TSEN54Q7Z6J9 526 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 AMIGO2Q86SJ2 522 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SULF2Q8IWU5 870 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 LSMEM1Q8N8F7 131 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 WDSUB1Q8N9V3 476 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 GPR119Q8TDV5 335 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 DNAJA4Q8WW22 397 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 C1GALT1C1Q96EU7 318 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SPOCK3Q9BQ16 436 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SEMA6AQ9H2E6 1030 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 NMNAT1Q9HAN9 279 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 RHCGQ9UBD6 479 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 RIMS3Q9UJD0 308 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 FBXL2Q9UKC9 423 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 ACAD8Q9UKU7 415 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC7A7Q9UM01 511 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 A4GNTQ9UNA3 340 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 VDAC3Q9Y277 283 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 U3KQV3 271 aa10.91□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A0B4J2E0 115 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A1B0GX12 115 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 A0A1W2PRQ8 180 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 LRRC3CA6NJW4 275 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms