RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM108Q6UXF1 575 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 GRINAQ7Z429 371 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 ANKRD46Q86W74 232 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 UBE2J2Q8N2K1 259 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 ZNF563Q8TA94 476 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 PIGXQ8TBF5 258 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 ROPN1LQ96C74 230 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 ARL5BQ96KC2 179 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 EXOSC3Q9NQT5 275 aaKnown RBP21.08■□□□□ 0.97
LSM4-202ENST00000593564 MGAT4BQ9UQ53 548 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 B3GALT5Q9Y2C3 310 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 GPR171O14626 319 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 ITM2AO43736 263 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 RAD51DO75771 328 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 IGHV3-9P01782 118 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 RYKP34925 604 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 CLK1P49759 484 aaKnown RBP21.07■□□□□ 0.96
LSM4-202ENST00000593564 SLC16A1P53985 500 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 VSNL1P62760 191 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 PHC1P78364 1004 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 SAXO2Q658L1 398 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 EMBQ6PCB8 327 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 FRRS1Q6ZNA5 592 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 ZNF781Q8N8C0 355 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 VPS37AQ8NEZ2 397 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 RAB8BQ92930 207 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 TESCQ96BS2 214 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 PPP1R36Q96LQ0 422 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 MALT1Q9UDY8 824 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 SLC25A15Q9Y619 301 aa21.07■□□□□ 0.96
LSM4-202ENST00000593564 CIB4A0PJX0 185 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 CPSF4O95639 269 aaKnown RBP21.06■□□□□ 0.96
LSM4-202ENST00000593564 MYZAPP0CAP1 466 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 PTAFRP25105 342 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 KHKP50053 298 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 KCNJ10P78508 379 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 PLAURQ03405 335 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 C11orf71Q6IPW1 123 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 KLHL17Q6TDP4 642 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 ADGRG3Q86Y34 549 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 PIAS4Q8N2W9 510 aaPredicted RBP21.06■□□□□ 0.96
LSM4-202ENST00000593564 OR52N5Q8NH56 324 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 ZG16BQ96DA0 208 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 NEURL3Q96EH8 262 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 PKNOX2Q96KN3 472 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 ADAD1Q96M93 576 aaKnown RBP21.06■□□□□ 0.96
LSM4-202ENST00000593564 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.06■□□□□ 0.96
LSM4-202ENST00000593564 ASB6Q9NWX5 421 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 TAS2R16Q9NYV7 291 aa21.06■□□□□ 0.96
LSM4-202ENST00000593564 CCT8L1PA6NM43 557 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 SERPINE1P05121 402 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 DHRS4L1P0CG22 281 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 PTNP21246 168 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 CD40P25942 277 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 TTKP33981 857 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 NTF4P34130 210 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 ABCE1P61221 599 aaKnown RBP21.05■□□□□ 0.96
LSM4-202ENST00000593564 ARFGAP2Q8N6H7 521 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 DHRS9Q9BPW9 319 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 OR11A1Q9GZK7 315 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 YAE1D1Q9NRH1 226 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 CBLN4Q9NTU7 201 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 TRAPPC4Q9Y296 219 aa21.05■□□□□ 0.96
LSM4-202ENST00000593564 ALPK2Q86TB3 2170 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 E7EQL1 145 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 SSX4O60224 188 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 MRPL33O75394 65 aaKnown RBP21.04■□□□□ 0.96
LSM4-202ENST00000593564 ZNF83P51522 516 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 IRX1P78414 480 aaPredicted RBP21.04■□□□□ 0.96
LSM4-202ENST00000593564 HPCAP84074 193 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 H3F3AP84243 136 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 CASP8Q14790 479 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 CHI3L2Q15782 390 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 DPY19L1Q2PZI1 675 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 OR7E24Q6IFN5 339 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 SLC22A25Q6T423 547 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 HIPK1Q86Z02 1210 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 CCDC103Q8IW40 242 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 AENQ8WTP8 325 aaKnown RBP21.04■□□□□ 0.96
LSM4-202ENST00000593564 DNAJA3Q96EY1 480 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 MUS81Q96NY9 551 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 RHNO1Q9BSD3 238 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 TMEM109Q9BVC6 243 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 CACNG6Q9BXT2 260 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 TMEM181Q9P2C4 612 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 MARCOQ9UEW3 520 aaPredicted RBP21.04■□□□□ 0.96
LSM4-202ENST00000593564 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.04■□□□□ 0.96
LSM4-202ENST00000593564 RAP2CQ9Y3L5 183 aa21.04■□□□□ 0.96
LSM4-202ENST00000593564 IGHV4-30-2A0A087WSY4 118 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 PRAMEF27A3QJZ7 478 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 WDR91A4D1P6 747 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 CLDN24A6NM45 220 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 SNUPNO95149 360 aaKnown RBP21.03■□□□□ 0.96
LSM4-202ENST00000593564 CHI3L1P36222 383 aaPredicted RBP21.03■□□□□ 0.96
LSM4-202ENST00000593564 MAGEA8P43361 318 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 HTR3AP46098 478 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 IDH2P48735 452 aaKnown RBP21.03■□□□□ 0.96
LSM4-202ENST00000593564 NUDT6P53370 316 aa21.03■□□□□ 0.96
LSM4-202ENST00000593564 CLNS1AP54105 237 aaKnown RBP21.03■□□□□ 0.96
LSM4-202ENST00000593564 CHRNEQ04844 493 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms