RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 GRINAQ7Z429 371 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 P2RY8Q86VZ1 359 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 LSRQ86X29 649 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-207ENST00000593089 OIT3Q8WWZ8 545 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 APH1AQ96BI3 265 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 TESCQ96BS2 214 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 HS6ST2Q96MM7 605 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 SLC35A5Q9BS91 424 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 TMEM109Q9BVC6 243 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 NUF2Q9BZD4 464 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 OR11A1Q9GZK7 315 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 SAP130Q9H0E3 1048 aa18.06■□□□□ 0.48
TRIM47-207ENST00000593089 MARCOQ9UEW3 520 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-207ENST00000593089 CHD3Q12873 2000 aaKnown RBP18.06■□□□□ 0.48
TRIM47-207ENST00000593089 CIB4A0PJX0 185 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 PRAMEF27A3QJZ7 478 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 CCT8L1PA6NM43 557 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 BIRC5O15392 142 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 ADAM11O75078 769 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 CRLF1O75462 422 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 PMS2P2O95744 297 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 GUSBP08236 651 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 SLC1A6P48664 564 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 KCNJ10P78508 379 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 HPCAP84074 193 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 CHRNEQ04844 493 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 CASP8Q14790 479 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-207ENST00000593089 ARFGAP2Q8N6H7 521 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 OR52N5Q8NH56 324 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 NEURL3Q96EH8 262 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 SORT1Q99523 831 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-207ENST00000593089 FAIMQ9NVQ4 179 aa18.05■□□□□ 0.48
TRIM47-207ENST00000593089 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-207ENST00000593089 A0A1W2PR80 420 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 RGS16O15492 202 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-207ENST00000593089 TP53P04637 393 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-207ENST00000593089 LBPP18428 481 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 IDH2P48735 452 aaKnown RBP18.04■□□□□ 0.48
TRIM47-207ENST00000593089 ZNF83P51522 516 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 CLNS1AP54105 237 aaKnown RBP18.04■□□□□ 0.48
TRIM47-207ENST00000593089 NME5P56597 212 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 OR2B6P58173 313 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 PLAURQ03405 335 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 FAM174BQ3ZCQ3 159 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 SSX8Q7RTT4 187 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 DTX2Q86UW9 622 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 ADGRG3Q86Y34 549 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 CCDC103Q8IW40 242 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 PIGXQ8TBF5 258 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 EXOSC3Q9NQT5 275 aaKnown RBP18.04■□□□□ 0.48
TRIM47-207ENST00000593089 HDGFL3Q9Y3E1 203 aa18.04■□□□□ 0.48
TRIM47-207ENST00000593089 E9PBE3 544 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 HMGN4O00479 90 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 AP3D1O14617 1153 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 GPR171O14626 319 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 MRPL33O75394 65 aaKnown RBP18.03■□□□□ 0.48
TRIM47-207ENST00000593089 THBS1P07996 1170 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 BGNP21810 368 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 S100A3P33764 101 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 NTF4P34130 210 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 DPY19L1Q2PZI1 675 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 TMEM108Q6UXF1 575 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 RNF130Q86XS8 419 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 ANKFN1Q8N957 763 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 CNOT9Q92600 299 aaKnown RBP18.03■□□□□ 0.48
TRIM47-207ENST00000593089 BARX1Q9HBU1 254 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-207ENST00000593089 ASB6Q9NWX5 421 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.03■□□□□ 0.487e-7■■□□□ 13
TRIM47-207ENST00000593089 POU2F3Q9UKI9 436 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 B3GALT5Q9Y2C3 310 aa18.03■□□□□ 0.48
TRIM47-207ENST00000593089 V9GYY5 206 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-207ENST00000593089 TMED7-TICAM2A0A0A6YYA0 188 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 GOLGA8QA0A0J9YX86 632 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 GOLGA8OA6NCC3 632 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 GOLGA8NF8WBI6 632 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SSX4O60224 188 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 MAGEA8P43361 318 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 CLK1P49759 484 aaKnown RBP18.02■□□□□ 0.48
TRIM47-207ENST00000593089 FOXG1P55316 489 aaPredicted RBP18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SPOCK1Q08629 439 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SYPL1Q16563 259 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 AGAP6Q5VW22 663 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 AP1ARQ63HQ0 302 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 WDR93Q6P2C0 686 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SLC22A25Q6T423 547 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 DNM1P46Q6ZS02 220 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 ZBTB9Q96C00 473 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 RADILQ96JH8 1075 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 TEX37Q96LM6 180 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 CCDC115Q96NT0 180 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 GRIP2Q9C0E4 1043 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SSU72Q9NP77 194 aaKnown RBP18.02■□□□□ 0.48
TRIM47-207ENST00000593089 PNPOQ9NVS9 261 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 TAS2R16Q9NYV7 291 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 TMEM181Q9P2C4 612 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 BTNL2Q9UIR0 455 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 TMED7Q9Y3B3 224 aa18.02■□□□□ 0.48
TRIM47-207ENST00000593089 SLC25A15Q9Y619 301 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms